LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops7g00116	ATGGGTGCGACGTTGTTGTCGGAGCTTGCGACGGAGATAGTGGTGCCGGTGTGCGCCGTCGTGGGGATAGTGTTCTCGTTGGTGCAGTGGTACCTGGTGTCGCGCGTAAAGCTCACGCCCGAGTCGTCGTCGTCGTCACCGCGCAACAACAATAAGAATGGCTACGGAGACTACCTTATCGAAGAAGAAGAAGGAATAAACGACCACAACGTCGTTATCAAATGCGCTGAGATACAGAGCGCCATATCCGAAGGTGCAACATCCTTTCTTTTCACTGAATATCAATATGTGGGGATTTTCATGGCTGCTTTTGCAATTTTGATCTTCCTTTTCCTGGGCTCTGTGGAGAGCTTTAGTACCAAAAGTCAGCCCTGCACATACGATAAGACCAAGCTATGCAAACCTGCCCTTGCAACTGCACTCTTTAGCACTGTATCTTTTTTGCTTGGTGCTATAACTTCAGTCCTATCTGGTTACCTTGGGATGAAAATTGCTACCTATGCCAATGCTAGGACAACCTTGGAGGCAAGAAAGGGAGTTGGAAAGGCTTTTATTATTGCATTTAGGTCTGGTGCTGTGATGGGTTTCCTTCTCTCAGCTAATGGTCTTTTGGTGCTCTACATTGCAATCAATCTCTTCAAGCTATATTATGGTGATGATTGGGAAGGCCTTTTTGAGGCTATAACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGCGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCCGATTTAGTTGGAAAAGTTGAAAGAAATATCCCAGAGGACGATCCAAGAAACCCAGCTGTGATTGCTGATAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTCGGTTCATACGCTGAATCATCCTGTGCAGCCCTGGTTGTTGCTTCGATTTCCTCATTTGGAATCAACCATGATTTCACTGCTATGTTATATCCCCTACTTGTCAGTTCTATGGGTATTCTTGTCTGTTTGATCACTACTCTCTTTGCAACTGATTTCTTCGAGATCAAGGCAGTCAACGAAATTGAACCGGCATTGAAAAAACAGCTTATCATCTCGACAGTTCTCATGACAGTTGGAATTGCAATTATTAGTTGGATTGCTCTTCCATCATCCTTCACAATTTTCAACTTTGGGGCTCAGAAAGAAGTCAAGAGCTGGCAACTATTCTTGTGTGTGGGTGTTGGTCTCTGGGCTGGACTTATTATTGGATTTGTAACTGAATACTATACAAGCAATGCTTACAGTCCTGTACAAGATGTTGCCGATTCTTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTGGGTTACAAGTCCGTCATTATCCCTATTTTTGCCATTGCAATCAGCATTTTTGTCAGTTTTAGTTTTGCGGCAATGTATGGTATCGCTGTTGCTGCCCTTGGGATGCTGAGCACCATTGCTACTGGGTTGGCTATTGACGCCTATGGGCCCATTAGTGACAATGCAGGGGGTATTGCTGAGATGGCAGGCATGAGCCATCGCATCCGTGAGAGAACTGATGCACTTGATGCTGCTGGCAACACTACTGCTGCCATTGGCAAGGGATTTGCTATTGGGTCTGCCGCATTGGTGTCTTTGGCCTTGTTTGGTGCCTTTGTCAGCCGGGCAGGAATTTCAACTGTGGATGTCTTGACTCCCAAGGTCTTCATTGGACTCATAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGCAGGCAGTTCAATACCATTCCAGGACTCATGGAAGGTCATGCCAAGCCTGATTATGCTACCTGTGTCAAGATTTCTACTGATGCATCTCTTAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTCACACCACTTATAGTAGGTATCCTTTTTGGCGTGGAAACTCTTTCTGGTGTTCTTGCTGGCTCTCTGGTTTCTGGTGTGCAGATCGCAATATCAGCATCCAACACTGGTGGTGCCTGGGATAATGCTAAGAAATACATTGAGGCCGGTGCTTCTGAGCATGCACGGACATTGGGCCCTAAGGGATCTGATCCACACAAAGCAGCTGTTATTGGAGACACCATTGGAGACCCTCTAAAGGATACTTCGGGCCCTTCGCTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTTGTTTTTGCTCCATTTTTCGCCACCCACGGCGGCTTGCTTTTTAAGATCTTTTGA	2304	0.4644	MGATLLSELATEIVVPVCAVVGIVFSLVQWYLVSRVKLTPESSSSSPRNNNKNGYGDYLIEEEEGINDHNVVIKCAEIQSAISEGATSFLFTEYQYVGIFMAAFAILIFLFLGSVESFSTKSQPCTYDKTKLCKPALATALFSTVSFLLGAITSVLSGYLGMKIATYANARTTLEARKGVGKAFIIAFRSGAVMGFLLSANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLVSSMGILVCLITTLFATDFFEIKAVNEIEPALKKQLIISTVLMTVGIAIISWIALPSSFTIFNFGAQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASLKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF*	768

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops7g00116	767	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	757	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Rops7g00116	767	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	757	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Rops7g00116	767	PIRSF	H+-PPtase	7	765	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Rops7g00116	767	NCBIfam	V-type H(+)-translocating pyrophosphatase	10	762	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Rops7g00116	767	Pfam	Inorganic H+ pyrophosphatase	43	752	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops7g00116	Rops-Chr7	1675890	1680742	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops7g00116	5	630	Primary Pumps ATPases	AT1G15690	89.013	0.0	1135

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops7g00116	K23025		-	gmx:100803691	1408.28