Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00108 ATGTCCCACAAAAAGGAACCCAATTATTCTTCATTACCCGTTAGCTCATATCTAGAATTGCAGCATCAAAATGATCCCCCTAACTCTCTCCCAAGACTATCTTTTGATGAACCCGGGGAAAGGGAGTATTTGGGATCCAAGGTTGTCGACGACGATGACGATGACGATTTTGAAATTGACGTTGATAATTATCCACTTGTTGTTGTTGGGCCTAATAACAACGGTTCTGGGGTACCTGGGGCTGTGTTCAATTTGACTACCACGGTTATTGGGGCAGGGATTATGGCCCTCCCTGCCACCATGAAAGTTCTTGGAGTTTTTCTAGGGATTTTGTTGATTATTCTTATGGGGATCTTGTCAGAAATTAGTGTCGAATTGTTAGTGCGGTTTTCTGTCTTGTGTAAAGCCTCCTCTTATGGGGAGGTTGTTCAACATGCTGTGGGAAGGCCTGCTAGGATTTTGTCTGAGATCTGTATCATAATTAATAATGCTGGTGTTTTGGTGGTTTACTTGATTATCATGGGGGATGTTATGTCTGGTTCTCTTCATCATTTTGGGGTTTTTGATCAGTTGTTTGGAAATGGGGTGTGGGATCATAGGAAGCTTTTGATGTTTGTTGTCTTGGTGGTTTTTCTCGCACCCCTTTGTTCACTGGACAAGATTGATTCTTTGAGCTTGACTTCAGCTGCTTCAGTGGCTCTTGCTGTTGTTTTTGTTGTTGTTGCTTTTGTTGTTGCTTTCATTAAGCTTGTGGAAGGAACGATTGATGCTCCAAGGATGGGTCCTGATTTTAGCTCCAAAACCGCCATCTTGGATTTGCTAGTGGTGATTCCAATTATGACCAATGCATATGTTTGCCATTTCAATGTGCAGCCGATATATAATGAGCTTGAAGGGCGGTCTCCTCAGAAGATGAACCGAGTAGGAAGGATCACCACCACTTTGTGCATCCTAGTTTATGCTTCAACAGCAGTGTCAGGTTATCTACTATTTGGGGATGATACAGAATCTGATGTGCTGACTAATTTTGATAAGGATCTTGGTATTCGGTTTAGTTCAGCTATAAACTATATTGTTCGGGTTGGCTACATTCTGCATTTGATACTTGTCTTCCCTGTCATTCATTTCTCCCTACGCCAAACAGTGAATGCCTTGGTGTTTGAGCGATCACCTCCCCTATCAGAAAGTAGGAAAAGATCTCTGGGTTTGACTTTTGTTCTGCTAGTCCTCATATATATTGGGTCTACCATGATTCCAAACATTTGGACAGCTTTCAAGTTCACTGGGGCAACAACGGCTGTTTCATTGGGTTTTATATTTCCATCTCTTGTTTCATTAAAATTAAGTCATATGGGGGATTTGAGTTATACAGAATGGATTTTATCATGGTTAATGTTGGTATTGGCTGTGACTGTTAGCATAGTAGGAGTCGTTGGCAATGTCTATAGCATCCAGAGTAAGTCTCATTGA 1470 0.4156 MSHKKEPNYSSLPVSSYLELQHQNDPPNSLPRLSFDEPGEREYLGSKVVDDDDDDDFEIDVDNYPLVVVGPNNNGSGVPGAVFNLTTTVIGAGIMALPATMKVLGVFLGILLIILMGILSEISVELLVRFSVLCKASSYGEVVQHAVGRPARILSEICIIINNAGVLVVYLIIMGDVMSGSLHHFGVFDQLFGNGVWDHRKLLMFVVLVVFLAPLCSLDKIDSLSLTSAASVALAVVFVVVAFVVAFIKLVEGTIDAPRMGPDFSSKTAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRSPQKMNRVGRITTTLCILVYASTAVSGYLLFGDDTESDVLTNFDKDLGIRFSSAINYIVRVGYILHLILVFPVIHFSLRQTVNALVFERSPPLSESRKRSLGLTFVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVSLKLSHMGDLSYTEWILSWLMLVLAVTVSIVGVVGNVYSIQSKSH* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00108 489 PANTHER AMINO ACID TRANSPORTER 75 472 - -
Rops7g00108 489 Pfam Transmembrane amino acid transporter protein 76 479 IPR013057 -
Rops7g00108 489 MobiDBLite consensus disorder prediction 1 38 - -
Rops7g00108 489 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00108 Rops-Chr7 1596580 1598913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00108 6 488 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.984 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00108 - - gmx:100791860 742.265