Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00106 ATGCCCAAGCTGGTTCTCAAAGCTGGGAGCAGACCTCCATGGGTGGGTCTTGCAGCTGCAGTTTGGATCCAAATAGCTACTGGCAATCCTTACAACTTTCCACTCTACTCCTCTGCCCTCAAATCCGTGTTGGGTCTCAACCAGCAGCAGGTTACTATTCTGGGAGTGGCCAATGATGTTGGTGAGAACGTGGGTCTGCTTCCTGGTATTGCCTCCAACAAGTTCCCTCCTTGGGCTTTGCTTCTTCTTGGTGCTGCCCTTTGTTTCTTGGGTTATGGAGTTATCTGGCTTGCTGTTAGCCAAACTGTGTCCAGCTTGCCCTATGTGCTGCTATGGCTTGCACTTTGTGTTGCCACTAACAGCAGTGCATGGTTTGGCACAGCTGTGCTTGTTACCAACATGAGGAACTTTCCTCTCAGTAGAGGCACCATCTCTGGCACTCTTAAAGGTTACGTGGGGATTAGTGCTGCAGTATATACAGTAATATATAGCATGTTGCTGAAAGGATCTGCTTCTAAACTACTGTTATTCCTAGCTATTGGTGTTTCTGTTGTATGTTTGGTTATGATGTGCTTCATTCGGCCTTGTACTCCTCCTTCTGGGGAAGACTCTTCAGTGCATGTCCATTTTATTTTTACCCAAGTTGCAAGTATTTTACTTGCCACCTATCTTGTTGTGATCACAATAGTAAGCGACATGGTTTCCATAAGTGATGCTGTTTCCTACATCTTAGTTGCCATAATGATCATATTTCTGATGACTCCCCTTGCAATTCCTGTCAAAATGACACTTTTTCCTGCCAAGCCAAAGAGCAATGTTCCACAGGTTGGTGCATCAGATCAGTTGGCATCCGGTGGTGATGTTTCAAGGCAAACAAGTCCATTGCTGACACCATCTTCCTCAGCTGCATATCTTGTAAGTTTTCATGAAAATGAGGATGCTTCAGATGTTGAGACACTTATTGCAGAGGGGGAGGGAGCAGTAAGGAAGAAAAGGAGGCCTAAAAGGGGAGATGATTTCAAGTTCCATGAGGCTTTAGTCAAGGCTGACTTCTGGCTTCTTTGGTTTGCTTATTTTCTAGGGGTTGGCTCAGGAGTAACAGTTCTCAATAATTTGGCTCAAATTGGAGTTGCTTTGGGTGTAGAAGATACAACCATCTTGCTGTCAGTCTTCAGCTTTTGCAACTTTATGGGTCGTCTTGGTGCTGGTGCTGTTTCTGAACACTTTGTTAGGTTGAGAACACTACCTCGAACATTTTGGATGACTAGCGCACAAATAATTATGATCATAGCATTTTTCCTTTATGCTTCAGCTCTGGATGGCACTCTTTATGCTGCAACAGCTTTGCTTGGGATCTGCTATGGGGTTCAATATTCTATAATGGTTCCAACTGTTTCTGAGCTTTTCGGTTTGAAACACTTTGGTGTTATTTATAGCTTCATGATGCTAGGAAATCCGATTGGTGCTCTTCTTTTTTCTGTTTTCCTTGCTAGCAATGTTTATGATACAGAAGCTGCAAAGCAAGGAAACTCCACCTGCTATGGTGCAAATTGCTTCAGGCTCACTTTTCTGGTTCTGGCTGGTGTCTGTGGACTTGGTACCATCTTGAGTATAATTTTGACAGTTAGAATACGACCAGTATATCAAATGCTGTATACTGGGGGTTCATTTCGTCTGTCTCAGACTTCAAATCACTGA 1698 0.4382 MPKLVLKAGSRPPWVGLAAAVWIQIATGNPYNFPLYSSALKSVLGLNQQQVTILGVANDVGENVGLLPGIASNKFPPWALLLLGAALCFLGYGVIWLAVSQTVSSLPYVLLWLALCVATNSSAWFGTAVLVTNMRNFPLSRGTISGTLKGYVGISAAVYTVIYSMLLKGSASKLLLFLAIGVSVVCLVMMCFIRPCTPPSGEDSSVHVHFIFTQVASILLATYLVVITIVSDMVSISDAVSYILVAIMIIFLMTPLAIPVKMTLFPAKPKSNVPQVGASDQLASGGDVSRQTSPLLTPSSSAAYLVSFHENEDASDVETLIAEGEGAVRKKRRPKRGDDFKFHEALVKADFWLLWFAYFLGVGSGVTVLNNLAQIGVALGVEDTTILLSVFSFCNFMGRLGAGAVSEHFVRLRTLPRTFWMTSAQIIMIIAFFLYASALDGTLYAATALLGICYGVQYSIMVPTVSELFGLKHFGVIYSFMMLGNPIGALLFSVFLASNVYDTEAAKQGNSTCYGANCFRLTFLVLAGVCGLGTILSIILTVRIRPVYQMLYTGGSFRLSQTSNH* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00106 565 CDD MFS_Mch1p_like 12 534 - -
Rops7g00106 565 SUPERFAMILY MFS general substrate transporter 234 546 IPR036259 -
Rops7g00106 565 Gene3D MFS general substrate transporter like domains 348 548 IPR036259 -
Rops7g00106 565 Gene3D MFS general substrate transporter like domains 12 204 IPR036259 -
Rops7g00106 565 SUPERFAMILY MFS general substrate transporter 9 198 IPR036259 -
Rops7g00106 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 549 - -
Rops7g00106 565 Pfam Nodulin-like 13 260 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00106 Rops-Chr7 1575626 1577844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00106 1 565 Nodulin-like Gene Family AT1G80530 62.191 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00106 - - psat:127087605 920.998