Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00096 ATGAGCAGTGATCCTTATGTTGTACTCAAACTAGGGAATCAGACCGCAAAGACCAAGGTCATTAATAGCTGCTTGAATCCAGTTTGGAATGAAGAGCTGAATTTCACTCTGACTGAACCCTTGGGTGTTTTGAACTTGATAGGGAATGCTTGGATTGATGATGCTACAGGTGCAAAGGGTCTATTTGTTTACTTATGGACTCATGCTTTAAACTCAGATCAAACATGTGAATGTGCTCTTTTTGTGTACCTTGGCCTTGTGATTTGCATGCAGTCCTTGGGGTTAGAGGGGACACAAATCCGAGTTGCAACATCTGAAACCATCAATGCTCTGCCAACTTCCAATATCAAATTCAAATTCAAGATGAAGAAAAATTATATAAGGGATGAAAACAACTCAGCTATTGGTGAAGGTGGAATTGTGGCTGCAGGAACTGAAAAGGAGTGTTTTATCTAA 456 0.4013 MSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLIGNAWIDDATGAKGLFVYLWTHALNSDQTCECALFVYLGLVICMQSLGLEGTQIRVATSETINALPTSNIKFKFKMKKNYIRDENNSAIGEGGIVAAGTEKECFI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00096 151 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 46 IPR044518 GO:0005096|GO:0005543
Rops7g00096 151 Gene3D C2 domain 1 83 IPR035892 -
Rops7g00096 151 ProSiteProfiles C2 domain profile. 1 83 IPR000008 -
Rops7g00096 151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 72 IPR035892 -
Rops7g00096 151 Pfam C2 domain 2 39 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00096 Rops-Chr7 1413451 1418165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00096 1 46 C2H2 Transcription Factor Family AT4G05330 58.696 4.06e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00096 - - gmx:100779624 93.9745