Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00092 ATGGAGCAGTTGTGGGAGAATTGGCCTCTTGACATGGAAATTCAAATGGGGGATGAGAAGAATGTGCTAGAGCAGTTCCACAGAAGTGATGATGATGAGTTCTTAAGAGAAATCCTACAGCAACCAGCTTTGCATGCTGAATGTGAAGGTCAATCTTTAGTCAACGCCACCACCACAGATGGTAGCAGTTTATTGTCTAATAAGATGGCAGGCTCCGACAGGCTTAGCCCAAGGACGTGCATTCTGTCTTTCGAGAATTCCATGGTAATACCAGCTGCACATCAACGAAATGCAAATCAGGGCTCACCTTCTTCTAAAACTAATTCCCCATTCTCATCGAAGAAACGGACCCTGGAAATTCTGAACTTTGAACCAAAACCAAGGGCCACCCAAGGAGGGAAGAAGGCAAGAAGCGATTCTCAGACTCTGTGTCATATAATGGCAGAGAGAAAAAGAAGGAAGGAACTTTCAGAGAAGTTCATAGCACTTTCCGCCACCATTCCTGGCTTGGACAAGTCAGATACCGAAAACAAGATGGACCTGGCGCCCCATTAG 555 0.4577 MEQLWENWPLDMEIQMGDEKNVLEQFHRSDDDEFLREILQQPALHAECEGQSLVNATTTDGSSLLSNKMAGSDRLSPRTCILSFENSMVIPAAHQRNANQGSPSSKTNSPFSSKKRTLEILNFEPKPRATQGGKKARSDSQTLCHIMAERKRRKELSEKFIALSATIPGLDKSDTENKMDLAPH* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00092 184 PANTHER BHLH TRANSCRIPTION FACTOR 55 174 - -
Rops7g00092 184 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 179 IPR036638 GO:0046983
Rops7g00092 184 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 184 IPR011598 GO:0046983
Rops7g00092 184 Gene3D - 133 182 IPR036638 GO:0046983
Rops7g00092 184 MobiDBLite consensus disorder prediction 121 142 - -
Rops7g00092 184 MobiDBLite consensus disorder prediction 95 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00092 Rops-Chr7 1365573 1366792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00092 77 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 40.196 4.12e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00092 - - aprc:113856039 150.214