Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00081 ATGGAGAATAATGAGGAAATTCCATCAGCACCTGCAACGCCAGGCACTCCCGGTGCACCTCTTTTTGGTGGGCTTAAGTCTGAGAGAACTGGGAATGGTATTGGTAGGAAGAAGTCCCTCCTCAAGAATTGTAAGTGCTTCAGTGTTGAGGAGTGGACCTTAGAAGATGGAACATTACCCACCGTCTCTTGCTCATTGCCACCCCCTCCTGTCCCTCTTGCAAGAAAGGTAGGAGCTGAGTTTATAGGCACGTTCATTCTCATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGTCACAAGGCTCGGAGACTCTGATTGGATGTGCTGCCTCTACTGGTCTAGCCGTTATGATCATCATCCTCTCCACCGGTCACATCTCCGGTGCTCATCTCAACCCTGCTGTTACCATTTCATTTGCTGCATTAAAACACTTCCCATGGAAACATGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCTATTTGTGCTGCATTTACTCTCAAGGGAGTTTTTCACCCTTTCATGAGTGGAGGAGTCACCGTTCCTTCTGGAGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATCAGTTTTAATCTCATGTTCGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTTGGAGAACTCGCGGGAATCGCTGTGGGAGCTACTGTCATGCTCAATATACTCATAGCAGGGCCAATAACAGGAGGCTCGATGAACCCAGTAAGAACGCTAGGTCCAGCTATTGCCGCAAACAACTACAAGGCCATATGGGTCTATCTGGTAGCGCCCATACTTGGAGCTCTAGGTGGGGCAGGTACCTACACTGCGGTCAAGCTGCCAGAAGAAGATGATAATGCCAAGGCAAAGGCTTCAAACACCTTGAGCTTCAGAAGGTGA 915 0.4842 MENNEEIPSAPATPGTPGAPLFGGLKSERTGNGIGRKKSLLKNCKCFSVEEWTLEDGTLPTVSCSLPPPPVPLARKVGAEFIGTFILMFAGTATAIVNQKSQGSETLIGCAASTGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAFTLKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPITGGSMNPVRTLGPAIAANNYKAIWVYLVAPILGALGGAGTYTAVKLPEEDDNAKAKASNTLSFRR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00081 304 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Rops7g00081 304 Pfam Major intrinsic protein 73 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 SUPERFAMILY Aquaporin-like 72 292 IPR023271 -
Rops7g00081 304 Gene3D Glycerol uptake facilitator protein. 70 297 IPR023271 -
Rops7g00081 304 MobiDBLite consensus disorder prediction 1 27 - -
Rops7g00081 304 FunFam Aquaporin NIP2-1 63 295 - -
Rops7g00081 304 CDD MIP 75 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops7g00081 304 PANTHER AQUAPORIN NIP2-1 40 288 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00081 Rops-Chr7 1217456 1221773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00081 3 304 Major Intrinsic Protein MIP AT1G80760 78.247 3.76e-168 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00081 K09874 - gmx:100815637 480.33