Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00078 ATGCCTACCGCCGAATCTTCATCAGCTTCCGGCCAAACCATATGTGTCACCGGTGCCGGTGGCTTCATCGCCTCTTGGATGGTCAAGCTCCTCTTGGAAAAAGGCTACACTGTCAGAGGAACCGTGCGAAACCCAGATGATCCAAAAAATGGGCACTTGAAAGAGTTGGAAGGAGCATCTGAGAGGCTAACTCTGCATAAGGCTGATCTCCTTGATCTTCAATCTGTTAAAGAAGTCATTCAAGGCTGTGATGGTGTCTTTCACACCGCTTCTCCCGTCACTGATAACCCCGAAGAAATGGTGGAGCCAGCGGTGAATGGAGCCAAGAATGTGATCATAGCAGCTGCAGAAGCAAAAGTGCGACGTGTGGTGTTCACCTCATCAATTGGCGCCGTCTATATGGACGCCAATAGGAGTGTCGATGTTGTTGTTGACGAGTCTTGTTGGAGTGATTTAGAGTATTGCAAGAACACCAAGAACTGGTATTGTTATGGGAAGGCTGTGGCTGAACAAGCGGCATGGGATACGGCAAAAGAGAAAGGGGTTGACTTGGTTGTGGTCAACCCTGTTTTGGTTCTTGGACCATTACTACAACCCACCATCAATGCTAGCACAATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACTTATGCAAATGCTACACAGGCTTATGTGCATGTTAGGGATGTGGCTTTAGCCCACATACTTGTTTATGAGAAGCCTTCTGCTTCTGGTCGATACATATGTGCTGAAAGTTCACTGCACCGAGGAGAGCTAGTTGAAATTCTTGCCAAGTATTTCCCTGAGTACCCAATGCCCACGAAGTGTTCAGATGAAAAGAATCCAAGAGCAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTTACTCCAGTGAGTCACTGTTTATATGAAACCGTTAAGAGCCTCCAGGAGAAAGGTCACCTTCCTGTTCCTAAGCAAGAAGATTCTATTACTGTGAAATCATAA 1011 0.459 MPTAESSSASGQTICVTGAGGFIASWMVKLLLEKGYTVRGTVRNPDDPKNGHLKELEGASERLTLHKADLLDLQSVKEVIQGCDGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDANRSVDVVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYICAESSLHRGELVEILAKYFPEYPMPTKCSDEKNPRAKPYIFSNQKLKDLGLEFTPVSHCLYETVKSLQEKGHLPVPKQEDSITVKS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00078 336 CDD FR_SDR_e 15 301 - -
Rops7g00078 336 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Rops7g00078 336 Gene3D - 3 336 - -
Rops7g00078 336 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Rops7g00078 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 318 IPR036291 -
Rops7g00078 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00078 Rops-Chr7 1173030 1175506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00078 11 277 Monolignol Biosynthesis Gene Families AT1G80820 77.154 3.90e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00078 K09753 - gmx:100789070 607.831