Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00076 ATGGATCAACAACAACAACCACCAAGGAACAAAAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAGCTCCTAGGACAGGGGAACTTCGCAAAGGTGTACCATGGAAGAAACATGAGCAACAACGAGAGCGTGGCCATCAAAGTGATAAAGAAAGAGAAGCTGAAAAAGGAGAGGCTTGTGAAGCAAATCAAAAGGGAAGTGTCAGTGATGAGGCTTGTCCGTCACCCCCACATCGTGGAACTTAAGGAAGTTATGGCAAACAAGGCCAAAATCTTCTTGGTTGTCGAATACGTGAAAGGAGGCGAACTCTTCGCCAAGGTTGCAAAGGGAAAGATGAAGGAAGATGAGGCGAGAAAATACTTTCAACAACTCATCAGCGCCGTCGATTTCTGCCACAGCCGCGGCGTCACACACCGTGACTTGAAGCCAGAGAATTTGCTCTTGGACGAGAACGAAGACCTTAAAGTCTCCGACTTTGGCCTTTCGGCGTTGCCGGATCAGCGCAGATCCGACGGAATGCTTCTCACGCCGTGTGGGACTCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGGTATGATGGGTCTAAAGCTGATATATGGTCCTGTGGGGTTATCCTCTTTGCTTTGCTTTCTGGGTATCTCCCTTTTCAAGGTGAGAATGTGATGAGGATTTATAGCAAGTCTTTCAAAGCTGATTATGCACTTCCTGATTGGATCTCCCCTGGGGCTAAGAATTTGATCTCTAATTTGCTCGTTGTTGACCCTGAGAAGAGGTACTCCATCCCTGATATCATGAAGGATCCTTGGTTTCAATTTGGGTTCATGAAACCCATTGCTTTTTCAATGAAGGAGACTGCTTTGGATGATAACATTGATTTCAACGAGGAAGATTCTGATGATAATGATTTGGTTGGGGCTAAGCCAGCTCGTCCCTCTTACAATGCATTTGAGATCATTTCCTCTCTGTCTCATGGGTTTGATCTTAGGAACTTGTTTGAGACGAGGAAGAGATCCCCATCTATGTTCATTTCAAAGTTCTCAGCTTCTGCTGTGTTGACAAAGCTTGATACGGTGGCAAAGAAGCTGAATTTTAGGGTCACAGGGAAGAAGGATTTCATGGTGAGAATGCAGGGGGACACGGAGGGAAGGAAAGGGAAGCTGGCCATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCCGTCGTGGAATTCTCCAAGTCTGCCGGAGACACACTTGAGTACATAAAGTTCTGTGAGGATCAAGTTAGACCTTCTCTCAAGGACATCGTTTGGAGCTGGCAGGGTGACCCTCATGCTCAGCAGTGA 1338 0.4761 MDQQQQPPRNKRNILFNKYEIGKLLGQGNFAKVYHGRNMSNNESVAIKVIKKEKLKKERLVKQIKREVSVMRLVRHPHIVELKEVMANKAKIFLVVEYVKGGELFAKVAKGKMKEDEARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYALPDWISPGAKNLISNLLVVDPEKRYSIPDIMKDPWFQFGFMKPIAFSMKETALDDNIDFNEEDSDDNDLVGAKPARPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKFSASAVLTKLDTVAKKLNFRVTGKKDFMVRMQGDTEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEDQVRPSLKDIVWSWQGDPHAQQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00076 445 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Rops7g00076 445 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00076 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 431 - -
Rops7g00076 445 SUPERFAMILY Protein kinase-like (PK-like) 15 274 IPR011009 -
Rops7g00076 445 Gene3D Transferase(Phosphotransferase) domain 1 10 317 - -
Rops7g00076 445 Gene3D Kinase associated domain 1, KA1 318 436 - -
Rops7g00076 445 Pfam NAF domain 315 370 IPR004041 GO:0007165
Rops7g00076 445 FunFam Non-specific serine/threonine protein kinase 312 435 - -
Rops7g00076 445 ProSitePatterns Protein kinases ATP-binding region signature. 25 52 IPR017441 GO:0005524
Rops7g00076 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Rops7g00076 445 FunFam Non-specific serine/threonine protein kinase 12 311 - -
Rops7g00076 445 Coils Coil 47 67 - -
Rops7g00076 445 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00076 445 CDD CIPK_C 317 431 - -
Rops7g00076 445 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00076 445 ProSiteProfiles NAF domain profile. 311 336 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00076 Rops-Chr7 1130084 1132244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00076 1 442 CBL-interacting serine-threonine protein kinases AT5G25110 60.722 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops7g00076 Pkinase 2.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00076 - - gmx:100804244 754.977