Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00075 ATGGATTATTCATCGTCATGGATTAACACTTCCTTGGATCTCAACATTAATCCTCACAGGGTTCATGAAGAAGTTCCCAAAATTGAGGCGGAAAACAATTTTTTCCCATTGGGGGTGAAGAAGTCTTCTGTAAAAGAAGAGTCCACTAGTGCCTTGGCGGAGGAGCTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTGACCGAAATGCTCACAGAGATGTGTGAGAACTACAACACTTTGCAAAGCAACTTGATGGAATATATGAGGAAGAATCCTGATAAGGAGCTCAGCTCATCGAAGAAAAGGAAATCTGAAAGCAGTAACAACAATTGTAATCCAATGGTAGTTAATGGAAACTCTGAGAGCAGCTCAACTGATGAAGAATCATGCAAGAAACCAAGGGAAGAGACTATCAAGGCAAAAGTTTCCAGAGCTTATGTCAGGACCGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCTTACTTCAAATGCTCTTTTGCTCCAAGCTGCCCAGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCCGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATCCCCCACCTTCTCAAATGGAGGCAACATCTTCAGTGCCATGTTCTACATCTCTTAGTTCTTCCACACCAGCAGCTACCCTTGGCTGGACAAAATCTAGGTTCAGCCACGAGTCTAAGAACACAAATCCCAAAATTGATTCACCTGAAGTCCCGCAGATTTTGGTGGAACAGATGGCTTCTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTTCTTGCTGCCATCTCAGGAAAAATGTTGCACAATAATTAA 903 0.4297 MDYSSSWINTSLDLNINPHRVHEEVPKIEAENNFFPLGVKKSSVKEESTSALAEELKRVSAENKKLTEMLTEMCENYNTLQSNLMEYMRKNPDKELSSSKKRKSESSNNNCNPMVVNGNSESSSTDEESCKKPREETIKAKVSRAYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPPPSQMEATSSVPCSTSLSSSTPAATLGWTKSRFSHESKNTNPKIDSPEVPQILVEQMASSLTKDPNFRAALLAAISGKMLHNN* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00075 300 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g00075 300 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g00075 300 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g00075 300 MobiDBLite consensus disorder prediction 245 264 - -
Rops7g00075 300 MobiDBLite consensus disorder prediction 219 239 - -
Rops7g00075 300 MobiDBLite consensus disorder prediction 103 124 - -
Rops7g00075 300 MobiDBLite consensus disorder prediction 92 136 - -
Rops7g00075 300 Gene3D WRKY domain 140 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g00075 300 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 41 296 IPR044810 GO:0003700
Rops7g00075 300 MobiDBLite consensus disorder prediction 212 239 - -
Rops7g00075 300 FunFam WRKY transcription factor 40 143 220 - -
Rops7g00075 300 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g00075 300 Coils Coil 49 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00075 Rops-Chr7 1072121 1074036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00075 1 300 WRKY Transcription Factor Family AT1G80840 56.426 3.00e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops7g00075 WRKY 2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00075 - - gsj:114388658 454.521