Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00070 ATGGACGACTTCTTCGCTCTGATTTGCCCTAATTCTCAAAGTATATGGGATGGAAAGGGATTCTCCGAGTGTTTTGAAGACATTGTCTTAGGTTTTGCAGTGAACATAATGACTATTATTATGATTGTTGTGCTTGGACTTAAGAAAAAGATTGGTCGAGGAGTACAGAGATCAGAAGCCCAGATGACCCGTCCAGAGAAATTTGTCCTGGATTTTGTACCAGCTGTTGGAGCATGTTTTTCAATCTTGGATATAATTTTTCTGTGGAAGAAAGAACATGATGGTCACTTTGTTGGTTATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCACAAAGTGTGTCAGCAGTCATTACATAGTCCTGGACTGTGTCTTATGTTTCTGGTGGATTCTAAAACCAATATTGGGGGTTTTCCATTTGATCACGAAGTTTCCATCATTGGAGGTTTCAGTATTCATCAGGGAAAGTTTAGTTGTTTTCTTGAATATCTCATTTGGCATAGCTATCAATGTGATCTGGATAAAGAGACTATCTCCCAAAAGCAGTTCATTGGAAGATCCACTTCTTTCCAATGGCGCAGACCTTGAGGAAGGTGGCTCTCGTGACCTTGGAAATAATGGAAACTTATGGGATTTGATGACTTTCAAATTCGTAACTCCAGTAATGAATCGTGGTGTGGTAAAGCAATTAGACTCTGAAGATCTGCTACCGCTACCTACTGATATGGATCCCTCTTCCTGTCATGATATAATTTTATCCTGCTGGCGAGCTCAACTAAGTAATAATAGTTCAAACCCATCCTTGTTTAGAGCACTCTGTAGTGCATATGGATGGCCATATCTATGCTTGGGTTTATTGAAGGTGATTAATGATTGTATTGGTTTTGCGGGTCCATTGCTTCTCAACAAGCTGATCCGGTTTCTTCAACAAGGTTCAGCGAATTTGGATGGGTATTTACTTGCATTATCCTTGGGTCTCACCCCTATAATTAAATCCTTTTTAGATACGCAATATACTTTCCATCTTGCCAAACTGAAGCTAAAGCTGCGATCTAGTATCATGACTCTAATCTATGATAAGTGTCTATGTGTAAACCTAGCAGAGCGCTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTGGATGCTGATCGAACTGTCAACTTGTGCAATAGTTTCCATGATGTGTGGAGCCTGCCTTTACAAATTGGAGTGGCGCTTTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATAACCATTTTATTGATACCAGTGAATAAATGGATAGCAAAATTGATTGCAAGTGCCACTGAGCAAATGATGAAGGAGAAGGACGAAAGGATTCGTAGGACTGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTGATGGAGACAAGATATTTGGAAGTGAAACAATTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCAACACTCTTTTCTCTTTTCACATTTGGACTCTTTGCATTGATGGGACATCAACTGGATGCTGCAATGGTGTTCACTTGTCTTGCTTTGTTTAACACACTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCTTCATATCCTCCAGACGGTTGAGTAGGTTTCTCTCTTGTCCTGAACATAAACGTAAAGTGGGAGAGAGCAGTTCCTGTTCATCAGCATTCCTGAATAAACAGCCTGATTCTTTACAACAAGGTTTGGCTGTCTTTATCCAAGATGCATGTTGTACTTGGTCAAGCAGCGATGAAGAAGCTGTAAATTTGGTGTTGAATCATGTGACTCTAAGCCTGCCCAAGGGTTCCTTTGTTGCTGTTATTGGAGAGGTTGGTTCAGGCAAATCATCCCTGTTATATTCAATTCTTGGAGAAATGTGGCTTGCTGGTGGATCTATTTATTCCAATGGATCTGTAGCTTATGTACCACAGGTCCCTTGGATTTTATCTGGAACAGTACGTGACAATATATTATTTGGGAAATGCTATGATCCTGAAAGGTACGCTGAGACACTACAGGCATGTGCATTAGATGTTGATATCTCGTTGATGGTTGGAGGTGACATGGCTTATATAGGAGAGAAAGGAGTCAACTTATCGGGTGGTCAGAGAGCTCGTCTTGCTTTGGCAAGGGCACTGTATCATGGCTCAGATGTTATTATGCTTGATGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCAATGGATCTTACAAAATGCCATTCTAGGTCCTCTTATGCAGGGAAAAACTCGATTGCTCTGTACCCACAACATGCAGGCAATATATTCTGCTGATATCATTGTCGTATTGGACAAAGGACACGTGAAGTGGATGGGAAATTCAGCTGACTTTCCAGTTTCTTCATATACAGCATCCTCCCCATTGAATGAAATTGATTCAGCGTTACATAATCATGGACAATCTTGCAGCACAAATTCTTCTTCCAAATCCAAGGAGCAGTCTCTTTGTGATAGAGTTATTATGCATGCTCTGGAGGGAGCAGAGGAGGTAATTGAAGTTGAGTTGAGGAAAGAGGGAAAAGTCGAACTTGGAGTGTATAAGAATTATGCTGTCTTCACTGGCTGGTTCATCACAGTTGTTATATGTCTATCAGCTATTCTGATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATATTGGGTTGATACAACAACTGAAAGCGGTCAAACAAGATACTCTGTGTCTTTCTATCTGGCTATACTATGTCTCTTTTGTATTATGAATTCCTTCTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGCGGCTTACAAGCAGCAACTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCAGTTCTTTGATCAGACCCCGGGTGGAAGAATACTCAATAGGTTATCTTCAGATCTTTATATGATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTAGCTAATTTTGTAGGCCTGTTGGGTATTGCAATAATTTTGTCTTATGTGCAGGTCTTCTTCTTGGTCCTGATATTGCCATTTTGGTATATCTACAGTAGACTTCAGTTTTTCTACAGGTCAACATCGAGAGAATTACGAAGACTGGATAGTGTTTCTCGTTCTCCAATATATACGTCTTTCACTGAAACACTTGATGGATCATCAACTATCAGGGCATTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAACATGTAACATTGTATCAGAAGACTTCCTACACAGAGATAGTGGTGAGTCTGTGGTTTTCCTTGCGTCTTCAGTTACTAGCAGCATTTATCATCTCATTCATAGCCCTGATGGCTGTTGTCGGATCTCATGGCAGTCTGCCTATCAACTTCGGTACCCCAGGACTGGTCGGATTGGCCCTCTCATACGCAGCTCCAATTGTGTCCATGTTGGGGAGTTTCTTAACAAGTTTCACTGAAACAGAGAAGGAAATGGTTTCAGTTGAAAGAGCCCTTCAATACATGGACATTCCTCAAGAAGAACAAGCTGGATGCCTACACTTGAATCCAGATTGGCCAAATCAAGGAGTTATTGAATTCCAGCATGTTACTTTGAAATATATGCCATCTTTGCCAGCTGCACTCTGCAATATTAGTTTTAGAATTGCAGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACCCCAATATGTACAGGCTGCATCACAGTTGATGGCATGGACATTCAAAATATCCCTGTCAGAGAACTACGTACACATTTGGCTATTGTTCCTCAGAGTCCATTCTTGTTTGAAGGATCATTAAGGGATAACCTGGATCCATTCAAAATGAATGACGACTTAAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGTAGCTGGCGGGCTGGATATTCTTGTTAAGGAAGCGGGGATGTTATTTTCAGTTGGCCAGCGGCAGCTTCTTTGCCTTGCACGCGCATTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAATGCACGGCCAATGTAGACATTCATACTGCTTCACTGCTACAAAGTACCATATCTAGTGAATGCAAAGGAATGACAGTGGTCACAATTGCTCACCGGATTTCAACTGTCATAAATATGGATAACATTCTGATTCTTGACCATGGGAACCTGGCTGAACAAGGAAATCCGCAGGTTCTTCTGAAAGATGATACCTCTATATTTTCTAGTTTTGTTAAAGCTTCATCAATGTAA 4410 0.4043 MDDFFALICPNSQSIWDGKGFSECFEDIVLGFAVNIMTIIMIVVLGLKKKIGRGVQRSEAQMTRPEKFVLDFVPAVGACFSILDIIFLWKKEHDGHFVGYHKWFYSCSELMVWTNIILFTKCVSSHYIVLDCVLCFWWILKPILGVFHLITKFPSLEVSVFIRESLVVFLNISFGIAINVIWIKRLSPKSSSLEDPLLSNGADLEEGGSRDLGNNGNLWDLMTFKFVTPVMNRGVVKQLDSEDLLPLPTDMDPSSCHDIILSCWRAQLSNNSSNPSLFRALCSAYGWPYLCLGLLKVINDCIGFAGPLLLNKLIRFLQQGSANLDGYLLALSLGLTPIIKSFLDTQYTFHLAKLKLKLRSSIMTLIYDKCLCVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAKLIASATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMETRYLEVKQLATRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHKRKVGESSSCSSAFLNKQPDSLQQGLAVFIQDACCTWSSSDEEAVNLVLNHVTLSLPKGSFVAVIGEVGSGKSSLLYSILGEMWLAGGSIYSNGSVAYVPQVPWILSGTVRDNILFGKCYDPERYAETLQACALDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARALYHGSDVIMLDDVLSAVDVQVAQWILQNAILGPLMQGKTRLLCTHNMQAIYSADIIVVLDKGHVKWMGNSADFPVSSYTASSPLNEIDSALHNHGQSCSTNSSSKSKEQSLCDRVIMHALEGAEEVIEVELRKEGKVELGVYKNYAVFTGWFITVVICLSAILMQASRNGNDLWLSYWVDTTTESGQTRYSVSFYLAILCLFCIMNSFFTLVRAFSFAFGGLQAATKVHNRLLSKLINAPVQFFDQTPGGRILNRLSSDLYMIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLILPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDFFFAKFTEHVTLYQKTSYTEIVVSLWFSLRLQLLAAFIISFIALMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSMLGSFLTSFTETEKEMVSVERALQYMDIPQEEQAGCLHLNPDWPNQGVIEFQHVTLKYMPSLPAALCNISFRIAGGTQVGIIGRTGAGKSSVLNALFRLTPICTGCITVDGMDIQNIPVRELRTHLAIVPQSPFLFEGSLRDNLDPFKMNDDLKIWNALEKCHVKEEVEVAGGLDILVKEAGMLFSVGQRQLLCLARAFLKSSKVLCLDECTANVDIHTASLLQSTISSECKGMTVVTIAHRISTVINMDNILILDHGNLAEQGNPQVLLKDDTSIFSSFVKASSM* 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00070 1469 FunFam ATP-binding cassette (ABC) transporter, putative 1218 1466 - -
Rops7g00070 1469 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 217 1467 - -
Rops7g00070 1469 SUPERFAMILY ABC transporter transmembrane region 906 1214 IPR036640 GO:0005524|GO:0016020
Rops7g00070 1469 FunFam Multidrug resistance-associated protein ABC domain protein 268 586 - -
Rops7g00070 1469 Gene3D ABC transporter type 1, transmembrane domain 877 1216 IPR036640 GO:0005524|GO:0016020
Rops7g00070 1469 Gene3D ABC transporter type 1, transmembrane domain 278 585 IPR036640 GO:0005524|GO:0016020
Rops7g00070 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 827 IPR027417 -
Rops7g00070 1469 Pfam ABC transporter 1250 1396 IPR003439 GO:0005524
Rops7g00070 1469 Gene3D - 595 850 IPR027417 -
Rops7g00070 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops7g00070 1469 SMART AAA_5 1258 1442 IPR003593 GO:0016887
Rops7g00070 1469 SMART AAA_5 644 818 IPR003593 GO:0016887
Rops7g00070 1469 Pfam ABC transporter 635 767 IPR003439 GO:0005524
Rops7g00070 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 841 IPR003439 GO:0005524
Rops7g00070 1469 SUPERFAMILY ABC transporter transmembrane region 280 585 IPR036640 GO:0005524|GO:0016020
Rops7g00070 1469 CDD ABC_6TM_MRP7_D1_like 292 577 - -
Rops7g00070 1469 CDD ABCC_MRP_domain1 616 817 - -
Rops7g00070 1469 FunFam ABC transporter C family member 5 874 1215 - -
Rops7g00070 1469 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 910 1197 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops7g00070 1469 Pfam ABC transporter transmembrane region 291 557 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops7g00070 1469 Pfam ABC transporter transmembrane region 911 1160 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops7g00070 1469 Gene3D - 1217 1467 IPR027417 -
Rops7g00070 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1457 IPR027417 -
Rops7g00070 1469 CDD ABCC_MRP_domain2 1230 1449 - -
Rops7g00070 1469 CDD ABC_6TM_MRP7_D2_like 909 1209 - -
Rops7g00070 1469 FunFam ABC transporter C family member 13 595 851 - -
Rops7g00070 1469 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Rops7g00070 1469 ProSitePatterns ABC transporters family signature. 1368 1382 IPR017871 GO:0005524|GO:0016887
Rops7g00070 1469 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1232 1465 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00070 Rops-Chr7 981028 997108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00070 634 863 Calmodulin-binding Proteins AT2G36910 28.800 2.50e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00070 K05674 - gmx:100814181 2543.07