Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00059 ATGATCATCAATGTGAAGGAATCGACGATGGTGCGTCCGGCAGAGGAGACGCCGCGGAGGCCGTTGTGGAACTCCAACGTGGATTTGGTGGTGCCGAATTTTCATACACCGAGCGTCTACTTCTACAGGCCAAACGGCTCCTCCAATTTCTTCGACGCCAATATTCTGAAGGAGGCTCTGAGCAAGGTTCTTGTTCCGTTCTACCCTATGGCCGCCCGCCTCCGCCGTGACGACGACGGTCGCGTCGAGATTTATTGCGACGGCCAGGGGGTTCTTTTCGTCGAGGCTGATACCACCTCCTCCATCGACGACTTCGGCGATTTCGCTCCCACACTTGAGCTCCGGCAACTCATCCCCGCCGTCGATTATTCTGCCGGCATTGAAACGTATCCACTGTTGGTGTTGCAGGTAACATATTTCAAATGTGGAGGGGTCTCATTAGGCGTAGGTATGCAACACCATGTAGCAGATGGAGCCTCTGGTCTTCACTTTATCAATTCATGGTCAGATGTGGCTCGTGGCTTGGATGTTTCACTCCCACCATTCATTGACAGGACACTACTCCTTGCCCGAGACCCACCTCAACCTGTTTTTGATCACATTGAATACAAGCCCCCTCCAGCCATGAAGACTGCCCTGCAACCAGCAAAACCAGGCTCAGACAGTGTGGCAGTCTCCAATTTCAAATTGACTCGTGACCAGCTGAACACCCTCAAGAGTAAGTCCAGAGAAGATGGCAACACAATCAACTATAGCTCTTATGAGATGTTGGCTGGTCATGTATGGAAAAGTGTATGCAAGGCAAGAGCACTACCTAATGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTCCCGCCAGGTTACTTTGGCAATGTGATCTTCACAACCACACCTATAGCAGTGGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAATGCGTTGTCACGAATGGACAATGAATATCTGAGATCGGCTCTGGACTATCTAGAGCTACAGCCTGATTTAAAAGCTCTTGTTCGTGGAGCACATACTTTTAGGTGTCCAAATCTTGGTATCACCAGCTGGGTAAGACTCCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGACCTGGTGGCATTGCATACGAGGGGCTATCCTTCATAATTCCAAGTTCAACAAATGATGGGAGCTTATCTGTGGCAATGGCTCTGCCGCCTGAGCAGATGAAAGTCTTTCAGGAATTGTTTTATGACATTTGA 1302 0.4946 MIINVKESTMVRPAEETPRRPLWNSNVDLVVPNFHTPSVYFYRPNGSSNFFDANILKEALSKVLVPFYPMAARLRRDDDGRVEIYCDGQGVLFVEADTTSSIDDFGDFAPTLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDVARGLDVSLPPFIDRTLLLARDPPQPVFDHIEYKPPPAMKTALQPAKPGSDSVAVSNFKLTRDQLNTLKSKSREDGNTINYSSYEMLAGHVWKSVCKARALPNDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALSRMDNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAMALPPEQMKVFQELFYDI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00059 433 Gene3D - 212 433 IPR023213 -
Rops7g00059 433 Gene3D - 1 205 IPR023213 -
Rops7g00059 433 Pfam Transferase family 3 431 - -
Rops7g00059 433 FunFam Tryptamine hydroxycinnamoyl transferase 210 431 - -
Rops7g00059 433 SUPERFAMILY CoA-dependent acyltransferases 49 180 - -
Rops7g00059 433 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Rops7g00059 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00059 Rops-Chr7 842368 847534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00059 1 433 Monolignol Biosynthesis Gene Families AT5G48930 76.905 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00059 K13065 - gmx:100801923 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00059 7 842368 847534 Rops4g02346 4 50574437 50586921 PCT