Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00057 ATGGTTTACTTACAAACATTGTTCTTCCTTCTGTTAGTAACATTTGGTCACTCAAGGCACCACTACCACCACCCCCCTTCTCATTCCTTACATACAGATAAAGCTGCTCTTCTGGAATTCAAAAAAACAATCATATCAGACCCGCATTCCTCACTTGCTAACTGGGGGGATGAAGCAGTTCACGTGTGCAACTTCACTGGTGTTGAATGCGAAAAAATCCATCACCGTGTTATAAGACTAATCCTTCATGATAATGCTCTGGTGGGGCTGCTTTCACCCACTCTTTCCAATCTCACTGGACTGCACGTACTTGAGATCGTTAACAATCACTTATTTGGCATTATTCCACCTGAATTTTCCTCCCTCACACGTGCTCACCGGATCATTCTTGAAGGGAATAATTTGCATGGCTCAATACCAGAGTCCTTTTCCCAGCTTTCCAAGCTTAACGTTCTGGTCATTAAGGAAAATAACATAACAGGTTCACTTCCTCCATCTCTCTTTTCCAATTGCACTCTACTCTACATTGTGGACTTCTCCGGAAACTCCCTAACTGGTCAAATCCCTGAAGAGATTGGAAACTGCCCGGGCATATGGAGTATCAATTTATACAACAATCAATTCACAGGACAGCTTCCTCTCTCTCTGACTAATCTATCGCTTGAAAATTTAGACATCGAGTACAATTATCTATCTGGTGAATTGCCCACAAAGTTTGTTAGCAGCTGGCCCAAACTCCTTTACCTTCATTTATCATACAACCAAATGGTAAGTCATGATAACAACACCAATCTTGATCCATTTTTCACTGCCCTTAGAAACAACAGTGATCTAGAGGAGCTTGAATTGGGAGGCATGGGCCTTGGGGGAAGGTTCTCCAATACTATCGCCAGCCAACTTGGCACTACCAGTCTAAGAACGTTACTCCTACAGGAAAACCAAATTTTTGGATCAATTCCTCACAGCATAGCAAATCTTTCAATGCTTTTGATCCTGAATTTAACATCCAATCTTCTAAATGGAACTATTTCCTCTGAGATTTGCAGATTACCAAACTTGGAACAACTTTTCTTATCACACAACCTTTTTAAAACTTTAATTCCAGAAGCATTAGGCAAGTGTCTACATCTGGGTCTACTAGATCTGTCACACAATGAATTTTCAGGTAGGATTCCAGAAAGTTTGGGAAATTTGTCTCGACTGAATTATTTGTTTCTCAACAATAACCTTCTCTCTGGATCAATACCTCCTACATTGGGAAGGTGCACTAATCTGTATAAGCTTGATTTGTCCTATAATAGATTGACAGGAAGCATCCCACTTGAACTCTCAGGTTTGCATGAGATCAGAATTTTCATCAATGTCTCTCATAATCATCTTGAAGGTCCCCTGCCTATTGAGCTCAGCAAATTAGAAAAGGTTCAGGAGATGGATCTTTCATCAAATCACCTAACTGGAAGTATCTTCCCTCAGATAGCAGGATGCATTGCTGTTTCCATGATAAATTTTTCCAACAATTCTCTTCAAGGTGAGCTCCCACAATCCCTAGGTGATCTGAAGAACCTCGAATCTTTTGATGTTTCAAGAAATCAATTATCTGGATTGATACCAGCAACACTTGGTGAAATTGACACACTCACTTTTCTCAATTTATCGTTCAACAACCTTGAAGGAATGATTCCATCTGGTGGTATCTTTAATTCAGTGTCAAATTTACCATTCTTGGGAAATCCACGACTCTGTGGGACAATTGCTGGCATACCCTTGTGCTCTCAAAGGAGACGATGGATTCACACTCGTTTGTTCTTGATTATATTCATTTTGGTCATCTTCATATCAACACTCTTGTCAACAATTTGCTGTGCAATTGGATGCAAGCGTGTTAAAGTAATCATCTCTCAGAGGACTGAGGCTAGCATTAAACCAGCTAGACTTGAGTTGATAAGTGGCTTCCCAAGAATCACATATAAAGAACTATCTGATGCCACTGGAGGATTTGACAATCAGAGACTTGTTGGATCAGGTAGTTATGGACATGTGTACAGGGGAGTTCTTACGGACGGGACTTCAATAGCCGTTAAGGTGCTACATTTGCAAACTGGAAATTCTACCAAGAGCTTTAGCAGAGAATGCCAAGTTATGAAGAGAATTAGGCACAGGAATCTGATAAGGATTATCACAGCATGTAGCCTACCTGATTTTAAGGCTCTTGTTCTACCTTATATGGCCAATGGGAGCTTGGAGAGCCACCTCTATCCTTCTTCTGGATCATCTGACTTGAGTGTTATCCAGAGGGTGAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCATCATTCTCCAGTCAAAGTCATCCACCGTGATCTAAAACCAAGCAATGTTCTTCTCAATGATGACATGACAGCTCTAGTTTCTGACTTTGGGATTGCAAGGCTAGTTATGAGTGTTGGAGGAGGAAATGGTGGGGCTATCGATAACATGGGGAAATCCACTGCAAATTTGTTACGTGGATCCATTGGATACATTGCGCCAGAATATGGATTTGGATCAAATACATCTACCAAAGGAGATGTCTATAGCTTTGGCATTCTGGTTCTTGAGATGATTACTAGAAGAAGACCAACAGACGACATGTTTGTTGGTGGGTTAAGTCTGCAAAACTGGGTAAAGAGTCACTATCATGGAAGGGTAGAAAAAGTGATAGACCCTTCTTTGGTGACAGCTTCAAGAGATCAATCACAAGAGGTTAAAAAGATGTGGGAAATTGCTATTGTGGAGTTACTTGAGTTGGGGATACTTTGCACACAAGAGTCACCTTCAACACGACCTACCATGCTTGATGCCGCAGATGACTTAGATCGTCTCAAGAGATACCTTAATGGGGACACAACTGGAACTTTTGCCTCGTCTCTTGGAATTTCATCTTCCACCATAAGTGGTGATCGACGGTTTTCTCTTCTTTAG 2973 0.4107 MVYLQTLFFLLLVTFGHSRHHYHHPPSHSLHTDKAALLEFKKTIISDPHSSLANWGDEAVHVCNFTGVECEKIHHRVIRLILHDNALVGLLSPTLSNLTGLHVLEIVNNHLFGIIPPEFSSLTRAHRIILEGNNLHGSIPESFSQLSKLNVLVIKENNITGSLPPSLFSNCTLLYIVDFSGNSLTGQIPEEIGNCPGIWSINLYNNQFTGQLPLSLTNLSLENLDIEYNYLSGELPTKFVSSWPKLLYLHLSYNQMVSHDNNTNLDPFFTALRNNSDLEELELGGMGLGGRFSNTIASQLGTTSLRTLLLQENQIFGSIPHSIANLSMLLILNLTSNLLNGTISSEICRLPNLEQLFLSHNLFKTLIPEALGKCLHLGLLDLSHNEFSGRIPESLGNLSRLNYLFLNNNLLSGSIPPTLGRCTNLYKLDLSYNRLTGSIPLELSGLHEIRIFINVSHNHLEGPLPIELSKLEKVQEMDLSSNHLTGSIFPQIAGCIAVSMINFSNNSLQGELPQSLGDLKNLESFDVSRNQLSGLIPATLGEIDTLTFLNLSFNNLEGMIPSGGIFNSVSNLPFLGNPRLCGTIAGIPLCSQRRRWIHTRLFLIIFILVIFISTLLSTICCAIGCKRVKVIISQRTEASIKPARLELISGFPRITYKELSDATGGFDNQRLVGSGSYGHVYRGVLTDGTSIAVKVLHLQTGNSTKSFSRECQVMKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESHLYPSSGSSDLSVIQRVNICSDIAEGMAYLHHHSPVKVIHRDLKPSNVLLNDDMTALVSDFGIARLVMSVGGGNGGAIDNMGKSTANLLRGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMITRRRPTDDMFVGGLSLQNWVKSHYHGRVEKVIDPSLVTASRDQSQEVKKMWEIAIVELLELGILCTQESPSTRPTMLDAADDLDRLKRYLNGDTTGTFASSLGISSSTISGDRRFSLL* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00057 990 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 367 955 - -
Rops7g00057 990 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 742 967 - -
Rops7g00057 990 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Rops7g00057 990 SUPERFAMILY L domain-like 303 582 - -
Rops7g00057 990 SUPERFAMILY L domain-like 31 286 - -
Rops7g00057 990 ProSiteProfiles Protein kinase domain profile. 666 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00057 990 SMART serkin_6 666 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00057 990 Pfam Leucine rich repeat 351 411 IPR001611 GO:0005515
Rops7g00057 990 Gene3D Phosphorylase Kinase; domain 1 648 741 - -
Rops7g00057 990 Gene3D Transferase(Phosphotransferase) domain 1 742 969 - -
Rops7g00057 990 FunFam Leucine-rich repeat receptor-like protein kinase 30 190 - -
Rops7g00057 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Rops7g00057 990 SMART LRR_typ_2 398 422 IPR003591 -
Rops7g00057 990 SMART LRR_typ_2 350 373 IPR003591 -
Rops7g00057 990 SMART LRR_typ_2 146 170 IPR003591 -
Rops7g00057 990 SMART LRR_typ_2 519 542 IPR003591 -
Rops7g00057 990 ProSiteProfiles Leucine-rich repeat profile. 424 447 IPR001611 GO:0005515
Rops7g00057 990 FunFam LRR receptor-like serine/threonine-protein kinase EFR 294 595 - -
Rops7g00057 990 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Rops7g00057 990 Pfam Protein kinase domain 667 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00057 990 CDD STKc_IRAK 672 958 - -
Rops7g00057 990 SUPERFAMILY Protein kinase-like (PK-like) 648 955 IPR011009 -
Rops7g00057 990 Gene3D Ribonuclease Inhibitor 220 596 IPR032675 -
Rops7g00057 990 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 647 741 - -
Rops7g00057 990 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00057 Rops-Chr7 837807 841103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00057 31 945 Receptor kinase-like Gene Family AT3G47570 35.107 2.90e-162 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops7g00057 Pkinase 6.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00057 - - gmx:100815766 1554.27