Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00043 ATGGATCAAGTTTCTCTGAACAGTGAGCCAGTAGCAGATGCAGATGGCGATGGCGATGGATTTGAGTGTGAGAGTGAATTGGTGAATCAAAGTGGGATGGTTGGAGGGGCAAATAACCCTCTTCCTCTTCCTCCTACTGTTGGAATGGAATTTGAGACCTATGAGGATGTCTATTACTTCTACAATTGCTACGCCAAGGAACAAGGATTTGGTGTTAGAGTAACCAACACATGGTACAGGAAGAGTAAGGAACGTTACAGAGCCAAACTTAGCTGCAGCAGTGCAGGCTTCAAGAAAAGAAGTGAAGCTAATCGGCCAAGACCTGAAACCAGAACTGGATGTCCTGCTATGATCAAGTTTAGGTTGATGGACTCCGAAAGGTGGAGGATTATTGAAGTTGAGCTTGACCACAATCACTTGATTAACCCAACCAGTGGAAAGTTTTATAAGTCCCATAAGCAAATTGTTCTTGGGACCAAAAGAGCATTGCGATTAGATTCTGCTGAGAAGGTTCAGAAAATTAGGATGTTTCGCACTGTGGTAATTGATGCTGAGCCTAATGCAAGTGTAGATGTTGATCAAGGCATGCCCAGAAAAAATATTTACTCCAATAAATTGAACCTAAAGAAAGGTGATGCTGAAGCAATTCTGAGTTTTTTAAGTCACTTGCAATTGGCAGATCCGGAGTTCTTCTATGTGGTGGATATCAATGAGAGTGGATGCTTGAGGAATTTGTTGTGGGCAGATGCAAAGTCCAGAGTAGCATACAGTTATTTTAGTGATGTGGTCACAATTGATACTACATGTTTGACAGGTGAATATCAAGTTCCCCTGGTTCTGTTCCTTGGATCAAACCACCATAAACAATCCATTTTGTTTGGTTGTGGATTGATTGCTGGTGATACCATTGAATCATATACATGGCTGTTCAGGGCATGGCTTACATGTATCTTAGGACGGCCCCCACAAGTTATCATTACCAACCAATGTGGAATCTTGCAAACTGTGGTTGCTGATGTTTTTCCAAGAGCTACACACTGTCTTTGCTTATTTAATATCATGCAAAAAATCCCAGAGAAGCTAGGAGCATCTCTAGAATATGAAGCAATCAGTGCAGCTTTGAACAGAGCAGTTTATTCGTCTCTGAGGGCTGAGGAATTTGAAGCCACTTGGGAGGACATGATGAAAAGCAATGAAATTAGGGGGCATAAATGGCTTCAATCATTATATGAGGATCGGAAAAGATGGGTTCCAGTTTATCTGAAGGAAATTTTCTTGGCAGGAATGTTTCAAATTCAACCTAGTGATGTTGTGTTATTTTTCTTTGACGGGTACCTTAATGAACAAACTTCTCTAAAAGAATTTTTAGAAAAATATGATCAGGCTTTACAGACAAAGCAACAACTTGAGGCTTTGGCAGATTTGGACTCAAAATCTTCTAGCTTTATGCCAAAATCGAGGTCTTACTTTGACCTGCAGGTTTCAAAGTTATACACCAATGAAATATTAAGAATGTTTGAAAGGGAAGTGGAAGGAATGTATTCTTGCTTTAGCACCAGACAGGTAAATGTTGATGGGCCAGTCATCACACACATTGTCCAGGAACAAGTTGAAGTGGAGGGAAATCAGAGAGATGCAAGAGATTATGAGGTGTACTACAATGGAGCTGAAGCGGAGGTCCTTTGCATTTGTGGTTTGTTCAATTTCAGAGGTTACTTGTGTAGGCATGCTTTATTTATCTTAAGCCAAAATGGCATAAAAGAGATCCCACCTCAGTACATTCTTTCTCGATGGAGAAAAGATATGAAGCGTAACAAAGTTTATGATCACAACTGCAGTGGCATTGATATTAATAACCCAGTTCATAGGTATGACCATTTATACAGACAGATTGTGAAGGTTGTGGAGGAAGGTAAGAAATCCCATGACCATTACAGGACTGCAGTACATGCATTGGAGAATGTATTGAACAAACTTCATCTTGTTAATGTAGAGGATCTTCCAATATAG 2010 0.402 MDQVSLNSEPVADADGDGDGFECESELVNQSGMVGGANNPLPLPPTVGMEFETYEDVYYFYNCYAKEQGFGVRVTNTWYRKSKERYRAKLSCSSAGFKKRSEANRPRPETRTGCPAMIKFRLMDSERWRIIEVELDHNHLINPTSGKFYKSHKQIVLGTKRALRLDSAEKVQKIRMFRTVVIDAEPNASVDVDQGMPRKNIYSNKLNLKKGDAEAILSFLSHLQLADPEFFYVVDINESGCLRNLLWADAKSRVAYSYFSDVVTIDTTCLTGEYQVPLVLFLGSNHHKQSILFGCGLIAGDTIESYTWLFRAWLTCILGRPPQVIITNQCGILQTVVADVFPRATHCLCLFNIMQKIPEKLGASLEYEAISAALNRAVYSSLRAEEFEATWEDMMKSNEIRGHKWLQSLYEDRKRWVPVYLKEIFLAGMFQIQPSDVVLFFFDGYLNEQTSLKEFLEKYDQALQTKQQLEALADLDSKSSSFMPKSRSYFDLQVSKLYTNEILRMFEREVEGMYSCFSTRQVNVDGPVITHIVQEQVEVEGNQRDARDYEVYYNGAEAEVLCICGLFNFRGYLCRHALFILSQNGIKEIPPQYILSRWRKDMKRNKVYDHNCSGIDINNPVHRYDHLYRQIVKVVEEGKKSHDHYRTAVHALENVLNKLHLVNVEDLPI* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00043 669 Pfam MULE transposase domain 262 356 IPR018289 -
Rops7g00043 669 MobiDBLite consensus disorder prediction 1 22 - -
Rops7g00043 669 SMART 26again6 560 587 IPR006564 GO:0008270
Rops7g00043 669 Coils Coil 452 472 - -
Rops7g00043 669 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 660 IPR031052 GO:0006355
Rops7g00043 669 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Rops7g00043 669 Pfam FAR1 DNA-binding domain 60 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00043 Rops-Chr7 673628 675637 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g00043 MULE 6.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00043 - K17604 gmx:100796267 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00043 7 673628 675637 Rops7g00043 7 673628 675637 ECH