Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00037 ATGGAGTCAACAACTGCAGTGTTGTTGCTAATCTTTCTTTGGGTTTCATTGTGTTGCCATGGTTCTATTATCGTATCCAAGGATGGGAGTGGAGATTACACATCTGTGGGTGAAGCTATTAGGAATGCTCCAGACTTGAGTGATGAACCTTACACCATTCACGTTCGAGCAGGTACTTATGAAGAGTACGTCCTCATTCCTCCTAAGAAGACTAATATTAAGCTCGTTGGAGATGGTCCTCACCACACCAAAATAGTTGGCTACCAAAATGGTTCCACCATAGACATCCGGGGAGATGGGTTCATGGGCCAAAACATGGGGTTTGTGAACTGGGCGGGGCTAAACGCAAGCGCAGCAGTGGCGGTTCGGAACGAGGCAGACAAGAGCATATTCTTCCAATGCTCCATCGAAGGATTCCAAGACACGCTGTGGGCTGTTTCCGGGAGGCAGTTCTACAAAAACTGTGACATCTACGGAACCGTTGACTTCATTTACGGCAACGCAGCGGCAGTGTTTCAAGACTGCATGGTGTACGCAAGGTTTCGTGAGTACGTGACATTCACGGCTCAGTCACGTGAGGATGGGAATGAGAAAACGGGGTTCACATTCCAGAGATGCAAATTCACAATGTCAGCAGAGGACATGTCGAGGAAGTCAGAGGTGCATGCGACGTTGGGGCGTCCATGGAGGGCCTATTCCACGGTGGCCATATTGCAGTGTTACATAGACTCCATTGTGGATCCAAAAGGTTGGGAAGAGATGGGGGGCCAACCCACTGATGAGGTGACGTACGTGGAGTATGAGAATGTTGGGCCTGGGTCTAACACTGATGGTAGGGTTAATTGGGCTGGTGTTAGAGCCCTTCGATACCCAATCCAAGCGGCCCCTTTCACTGCTTCCCGTCTCTTGGATGCTGACTCTTGGATTCCCACTACTGGTGTTCCCTACGACAATGGACTCTAG 963 0.4984 MESTTAVLLLIFLWVSLCCHGSIIVSKDGSGDYTSVGEAIRNAPDLSDEPYTIHVRAGTYEEYVLIPPKKTNIKLVGDGPHHTKIVGYQNGSTIDIRGDGFMGQNMGFVNWAGLNASAAVAVRNEADKSIFFQCSIEGFQDTLWAVSGRQFYKNCDIYGTVDFIYGNAAAVFQDCMVYARFREYVTFTAQSREDGNEKTGFTFQRCKFTMSAEDMSRKSEVHATLGRPWRAYSTVAILQCYIDSIVDPKGWEEMGGQPTDEVTYVEYENVGPGSNTDGRVNWAGVRALRYPIQAAPFTASRLLDADSWIPTTGVPYDNGL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00037 320 Gene3D - 19 320 IPR012334 -
Rops7g00037 320 Pfam Pectinesterase 23 305 IPR000070 GO:0030599|GO:0042545
Rops7g00037 320 SUPERFAMILY Pectin lyase-like 20 318 IPR011050 -
Rops7g00037 320 PANTHER PECTINESTERASE 23 311 - -
Rops7g00037 320 FunFam Pectinesterase 20 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00037 Rops-Chr7 611955 615524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00037 22 320 Carbohydrate Esterase AT2G26440 40.064 3.87e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00037 K01051 - gmx:102665195 504.212