Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00036 ATGGCCATTGAGAAAGAACAACAAAAGGATATCATATTCAGGTCGAGGCTTCCTGATATCTACATCCCCAAACACCTTCCCCTCCACTCTTACTGCTTTGAGAATCTGTCCCAGTTTGGATCACGCCCCTGCCTCATCAATGCCCCCACCGGACATGTCTACACTTACCACGACGTGGAGCTCACCGCTCGACGAGTTGCTTCAGGGCTGCTCAACATATTGGGAGTGGAACAGGGTGAGGTGATCATGATCTTGCTCCCCAATTCCCCTGAGTTCGTGTTCTCCTTTCTTGGTGCTTCTTACAGAGGTGCCATTGCCACTGCTGCCAACCCCTTCTTCACGCCCTCCGAGATCGCAAAGCAAGCAAAAGCTTCCAAGGCCAAGCTGATCATAACACAAGCCTCTTACTACGACAAGGTGAAGGAGTTGGAAGATGTGAAGGTGGTGTTGGTGGATTCCTCTCCTTCTGCTTCTTCAACCACGCATCTGCATTTCTCAGAGCTGAGCCAGGCTGATGAAAATGAATTACCGGAGGTGAAGATCAACCCCGATGACGTGGTGACCCTGCCCTATTCTTCGGGGACAACAGGTCTGCCAAAGGGGGTGATGTTAACGCACAAGGGATTGGTGACAAGCATAGCACAGCAGGTGGACGGGGACAACCCCAACCTCTATTACCACTCCCAGGATGTGATACTATGTGTGCTTCCCCTGTTTCACATCTACTCTCTCAACTCTGTCTTGCTTTGTGGCCTCAGAGCCAAGGCTGCCATATTGTTAATGCCCAAGTTCGAAATCAATGCCTTCCTGGGTCTGGTTCACAAACACAGAGTCACCATTGCACCCATTGTCCCTCCCATTGTTTTGGCCATTGCCAACTCACCTGACCTTCATAAGTATGACCTTTCTTCCATTAGGGTCTTGAAATCTGGGGGAGCTCCTCTTGGTAAAGAACTCGAAGACAACGTCAGGGCCAAATTCCCCAACGCCACACTCGGACAGGGATACGGAATGACGGAGGCAGGGCCAGTGCTGACAATGTGCTTAGCATTTGCTAAAGAACCGATAGATGTAAAGCCAGGTGCATGTGGAACTGTTGTAAGAAACGCAGAGATGAAGATTGTGGATCCTGAAACTGGCAATTCTTTACCTCGAAACCAGTCCGGTGAAATTTGCATAAGAGGCGACCAGATCATGAAAGGTTATGTAAATGATGGAGAGGCGACAGAGAGAACAATAGACAAAGAGGGTTGGTTACATACAGGTGACATTGGCTACATCGACGATGACGATGAGTTATTCATCGTTGATAGGTTGAAGGAATTGATCAAATACAAAGGATTTCAGGTGGCCCCTGCTGAACTTGAAGCCCTTCTTCTCTCTCATCCTAACATCTCTGATGCTGCTGTAGTTCCAATGAAGGATGAAGCAGCTGGAGAGGTCCCCGTTGCATTTGTGGTGATATCAAATGGTCACACCGACATAACCGAGGATGAAATTAAGCACTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTTTTCTTCATTGATGCAATCCCCAAGTCACCCTCTGGCAAAATCTTGCGTAAGGATCTGAGAGCTAAGTTAGCAGCTGCTGCTCCAAATTCAAATTCAAAATCAAATTAA 1659 0.478 MAIEKEQQKDIIFRSRLPDIYIPKHLPLHSYCFENLSQFGSRPCLINAPTGHVYTYHDVELTARRVASGLLNILGVEQGEVIMILLPNSPEFVFSFLGASYRGAIATAANPFFTPSEIAKQAKASKAKLIITQASYYDKVKELEDVKVVLVDSSPSASSTTHLHFSELSQADENELPEVKINPDDVVTLPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGDNPNLYYHSQDVILCVLPLFHIYSLNSVLLCGLRAKAAILLMPKFEINAFLGLVHKHRVTIAPIVPPIVLAIANSPDLHKYDLSSIRVLKSGGAPLGKELEDNVRAKFPNATLGQGYGMTEAGPVLTMCLAFAKEPIDVKPGACGTVVRNAEMKIVDPETGNSLPRNQSGEICIRGDQIMKGYVNDGEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPNISDAAVVPMKDEAAGEVPVAFVVISNGHTDITEDEIKHFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAAAPNSNSKSN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00036 552 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Rops7g00036 552 Pfam AMP-binding enzyme 35 445 IPR000873 -
Rops7g00036 552 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 440 - -
Rops7g00036 552 Gene3D - 440 543 IPR045851 -
Rops7g00036 552 CDD 4CL 22 536 - -
Rops7g00036 552 Gene3D - 5 439 IPR042099 -
Rops7g00036 552 SUPERFAMILY Acetyl-CoA synthetase-like 14 542 - -
Rops7g00036 552 FunFam 4-coumarate--CoA ligase 2 441 543 - -
Rops7g00036 552 Pfam AMP-binding enzyme C-terminal domain 454 530 IPR025110 -
Rops7g00036 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00036 Rops-Chr7 605704 610483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00036 10 508 Monolignol Biosynthesis Gene Families AT1G51680 70.553 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00036 K01904 - gmx:547944 871.307