Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00032 ATGTTTTTGGATCTCTCGTTCAATGTGTTTAGTGGAGGCATTCCCTCGGCCTTGGGGAATTGTAGTGGTTTATCACTATTTGCTTTATGTGATAACTTAGAGGGAAGTATTCCATCCTCCTTCGGTCTACTGACCAAGCTTTCTATTCTACGCCTTCCTGAGAACCTTTTGTCCGGAAAAATACCTCCAGAGATTGGTTATTGCAAGTCTTTGAATGAGTTACATTTGTCTTCCAATCGACTCGAGGGAAAGATTCCAAATGAACTGGGAAAACTAAGTGAACTGCGGGACCTGGAATTGTTTTCCAATAGCCTTTCCGGGGAACTGCCTTTGGAGATGACAGAGCTCAAGCAACTGAAAAACATCTCACTGTTTAACAACCAGTTCTCCGGAGTCATACCTCAAAGCTTTGGAATTAACAGCAGTTTAGTACAGCTGGACTTTACAAATAATAAGTTCACTGGCGCCATCCCACCAAATCTTTGTTTTGGCAAGAAGTTAAGTTTGTTGACTATGGGCTTCGATCAACTTCAAGGTAGCATACCTCCTGATGTTGGAAGTTGTACAACTCTTACAAGGCTCATCCTTAAACAAAATAACTTTGTTGGGCCTCTTCCTGAATTTGCAAGCAACCCCAATCTCACATTTATGGATATCAGCAACAACAAAATCAATGGAACAATTCCATCAAGTTTGGGAAACTGCACAAATCTCACTGACTTAAACTTGTCCGTGAACAAATTTGGAGGGCTTATATCCTCAGAGCTTGGAAACCTTGTGAATCTTCAGACACTGATTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATCTCAGCTGTCACACTGTACCAAAATGGACAAGTTTAATGTGGGCTACAATTTCCTAAATGGTTCACTACCATCGAGTTTGCAGAACTGGACGGCGCTGAACACATTGATTTTAAATGAGAATCGTTTTAGTGGGGGCATCCCAGCTTTCTTGTCGGGATTTAAAAAGCTTTCTGAACTAGAACTTGGTGGCAATATGTTTGGAGGCAGAATTCCAGGATCGGTGGGAGCGTTGCAATATTTGATCTATGGGTTGAATCTAAGTTCCAATGGGCTAATAGGTGACATTCCTGTGGAGATTGGAAACCTGAAAAATTTGCAAACACTGGATCTATCTCAGAACAATTTGACAGGAAAAATAGAAGTTCTGGGTGAGCTCCCTTCATTAGTTGAAATCAATATCTCATACAATTCTTTTCATGGGCCTGTTCCAAAGATGCTAATGAAGCTGCTTAATTCTCCCTTGTCATCATTTTTGGGGAATCCTGGGCTATGTATCACTTGTTCACCATCTGATGACTTGGTTTGCACTGAAACCAGCCATCTAAAACCATGTGATATCAAATCAACTAATCAGAAAGGTCTCAGTAAAGTTCAAATTATGATGATAGAACTTGGATCCGCAACATTTGTTGTTTTGCTGTTGCTTGGATTAGTTAATATTTTTTATTTTGGAAGAAAGTATAAGCAAGTCAATATCTCTGCTATTGAGTGTTCTTCATCCCTTCTTAACAAAGTCATGGAGGCTACAGAAAACATAAATGATCGGTATGTTATTGGCAGAGGAGCTTATGGAGTTGTTTATGAAGTCCTTGTAGGTCCAGACAAAGCTTTTGCTGTAAAAAAGCTAGAATTTGCTGCCAGCAAAGTGCACCGAGACATCAAACCAAGCAACATACTTCTAGACTCTAATATGGAACCTCACATAGCTGACTTTGGTATCGCAAAACTTTTGGACCAGTCTTTTGCTTCAAATCCTTCCATATCTGTGCCTGGTACAATTGGTTATATGGTACCCGAGAATGCTTATGCAACAACAAATAGTAGGGAGTCTGATGTATACAGTTATGGGGTAGTTTTGCTGGAGCTGATAACCGGAAAGAAGGCAGTGGATCCCTCATTTATGGAGGGTACCGATGTAGTTGGTTGGGTTAAATCTGTGTGGAGTGAAACAGGAGAAATTAATCATATTGTTGATTCAAGCCTTGCTGAGGAATTTCTAGCTATCCGTATAATGGAAAATGTAACCAAAGTGCTTATGGTGGCTTTGAGATGTACTGAGAAGGATCCACGCAAGAGACCCACAATAACAGAAGTTACAAAGCAATTATCAGATGCTCATCCACGAACACAGCTAAGAAGGATGAAGGGGTAG 2205 0.405 MFLDLSFNVFSGGIPSALGNCSGLSLFALCDNLEGSIPSSFGLLTKLSILRLPENLLSGKIPPEIGYCKSLNELHLSSNRLEGKIPNELGKLSELRDLELFSNSLSGELPLEMTELKQLKNISLFNNQFSGVIPQSFGINSSLVQLDFTNNKFTGAIPPNLCFGKKLSLLTMGFDQLQGSIPPDVGSCTTLTRLILKQNNFVGPLPEFASNPNLTFMDISNNKINGTIPSSLGNCTNLTDLNLSVNKFGGLISSELGNLVNLQTLILAHNNLEGPLPSQLSHCTKMDKFNVGYNFLNGSLPSSLQNWTALNTLILNENRFSGGIPAFLSGFKKLSELELGGNMFGGRIPGSVGALQYLIYGLNLSSNGLIGDIPVEIGNLKNLQTLDLSQNNLTGKIEVLGELPSLVEINISYNSFHGPVPKMLMKLLNSPLSSFLGNPGLCITCSPSDDLVCTETSHLKPCDIKSTNQKGLSKVQIMMIELGSATFVVLLLLGLVNIFYFGRKYKQVNISAIECSSSLLNKVMEATENINDRYVIGRGAYGVVYEVLVGPDKAFAVKKLEFAASKVHRDIKPSNILLDSNMEPHIADFGIAKLLDQSFASNPSISVPGTIGYMVPENAYATTNSRESDVYSYGVVLLELITGKKAVDPSFMEGTDVVGWVKSVWSETGEINHIVDSSLAEEFLAIRIMENVTKVLMVALRCTEKDPRKRPTITEVTKQLSDAHPRTQLRRMKG* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00032 734 ProSitePatterns Protein kinases ATP-binding region signature. 536 559 IPR017441 GO:0005524
Rops7g00032 734 ProSiteProfiles Leucine-rich repeat profile. 382 404 IPR001611 GO:0005515
Rops7g00032 734 PRINTS Leucine-rich repeat signature 214 227 - -
Rops7g00032 734 PRINTS Leucine-rich repeat signature 380 393 - -
Rops7g00032 734 Pfam Leucine Rich Repeat 71 92 IPR001611 GO:0005515
Rops7g00032 734 SUPERFAMILY Protein kinase-like (PK-like) 520 721 IPR011009 -
Rops7g00032 734 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 67 161 - -
Rops7g00032 734 Gene3D Transferase(Phosphotransferase) domain 1 555 732 - -
Rops7g00032 734 Gene3D Ribonuclease Inhibitor 209 448 IPR032675 -
Rops7g00032 734 Gene3D Ribonuclease Inhibitor 1 208 IPR032675 -
Rops7g00032 734 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 165 451 - -
Rops7g00032 734 Pfam Leucine rich repeat 212 272 IPR001611 GO:0005515
Rops7g00032 734 Pfam Leucine rich repeat 362 415 IPR001611 GO:0005515
Rops7g00032 734 Coils Coil 729 734 - -
Rops7g00032 734 SUPERFAMILY L domain-like 2 174 - -
Rops7g00032 734 PANTHER UNNAMED PRODUCT 166 648 - -
Rops7g00032 734 SMART serkin_6 530 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00032 734 SUPERFAMILY RNI-like 131 431 - -
Rops7g00032 734 Pfam Protein kinase domain 567 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00032 734 ProSiteProfiles Protein kinase domain profile. 383 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00032 Rops-Chr7 543864 546416 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00032 541 723 Receptor kinase-like Gene Family AT1G73080 47.872 1.72e-46 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops7g00032 Pkinase 8.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00032 - - gmx:100778035 813.142