Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops7g00030 | ATGTTTTTGGATCTCTCGTTCAATGTGTTTAGTGGAGGCATTCCCTCAGCCTTGGGGAATTGTAGTGGTTTATCACTATTTGCTGCTGTAAACAGTAACTTAGAGGGAAGTATTCCATCCTCCTTCGGTCTACTGACCAAGCTTTCTATTCTACGCCTTCCTGAGAACCTTTTGTCCGGAAAAATACCTCCAGAGATTGGTAATTGCAAGTCTTTGAATGAGTTACATTTGTATTCCAATCGACTTGAGGGAAAGATTCCAAATGACCTGGGAAAACTAAGTGAACTGCGGGACCTGGAATTGTTTTCCAATCAATTGATGGGTGAAATTCCACTTAGCATCTGGAAGATTCAAAGTCTTGAGCATCTCCTTGTATATAATAATAGCCTTTCCGGGGAACTGCCTTTGGAGATGACAGAGCTCAAGCAAATGAAAAACATCTCACTGTTTAACAACCACTTCTCCGGAGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTAGTTCAGTTGGACTTTACAAATAATAAGTTCACTGGCACCATCCCACCAAATCTTTGTTTTGGCAAGAAGTTAAGCTTGCTGACTATGGGCTTCAATCAACTTCAAGGTAGCATACCTCCTGATGTTGGAAGCTGTACAACTCTTAGAAGGGTCATCCTTAAACAAAATAACTTTATTGGGCCCCTTCCTGATTTTGAAGGCAACCCCAATCTCACATTTATGGACATCAGCAACAACCAAATCAATGGAACAATTCCATCAAGTTTGGGAAACTGCACAAATCTCACTGACTTAAATTTGTCCGTGAACAAATTTACAGGGCTTATACCCTCAGAGCTTGGAAACCTTGTGAATCTTCGGACATTGATTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATCTCAGCTGTCACACTGTACCAAAATGGACGAGTTTGATGTGGGATACAATATCCTAAATGGTTCACTACCATCGAGTTTGCAGAACTGGACGGCACTAAACACATTAATTTTAAGTGAGAATCATTTTAGTGGGGGCATCCCAGCTTTCTTGTCGGGATTTAAAAAGCTCTCTGAACTACGACTTGGTGGCAATATGTTTGGAGGCAGAATTCCAGGATCTGTAGGAGCGTTGCAAAATTTGATGTACGGGTTGAATCTAAGTTCCAATGGGCTAATAGGTGACATTCCTGTGGAGATTGGAAACCTGAAAAATTTGCAAACACTGGATCTATCTCAGAACAATTTGACAGGAAGAATAGAAGTTCTTGGTGAGCTCCCTTCATTAGTTGAAATCAATATCTCATACAATTCTTTTCATGGGCCTGTTCCAAAGATGCTAATGAAGTTGCTTAATTCTTCCTTGTCATCATTTTTGGGGAATCCTGGGCTATGTATCCGTTGTTCACCATCTGATGACATGGTTTGCACTGAAAGCAGCCATCTAAAACCATGTGATATCAATCAGAAAGGTCTCAGTAAAGTTCAAATTGTGATGACAGCACTTGGATCCTCAATATTTGTTGTTTTGCTGTTGCTGGGATTAGTTTATATTTTTATTTTTGGCAGAAAATCTAAGCAGGAAGTCAATATCTCTGCTATTGAGGGTTCTTCATACCTTCTTAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATCGGTATATCATTGGCAGAGGAGCCCATGGAGTTGTTTATAAAGCCCCGGTTGGTCCAGGTAAAGCTTTTGCTGTAAAGAAGCTAGGATTTGCTGCCAGCAGAGGTAAGAACTTGAGCATGGTCAGAGAGATTCAAACCCTTGGAAAAATTAGGCATCGAAATCTGGTTAAATTGGAAGACTTTTGGTTGAGAAAAGATTATGGTCTAATTTTGTATAGCTACATGCCAAATGGAAGCCTTCATGATGTTTTGCATGAAAAGATTCCACGACCATCCTTAGAGTGGAATGTCCGGTATAAGATAGCTGTTGGAATTGCTCATGCATTGGCTTATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAACCAAGCAACATACTTCTAGACTCTGATATGGAGCCTCACGTAGCTGACTTTGGTATTGCAAAACTTTTGGACCAGTCTTGTACTTCAAATCCTTCCATGTCTGTGCCGGGTACAATTGGTTATATAGCACCAGAGAATGCTTATGCAACAGCAAATAGTAGGGAGTCTGATGTATACAGTTATGGGGTAGTTTTGCAGGAGCTGATAACCAGAAAGAAGGCAGTGAATCCCTCATTTATGGAGGGTACTGATGTGGTGGTTTGGGTTAGATCTGTGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAGAGGAATTGCTAGATACCCATATAATGGAAAACGTAACAAAAGTTCTTATGGTGGCTTTGAGATGTACTGAGAAGGATCCACGCAAGAGACCCACAATGAGAGAAGTTACCAAGCAATTATCAGATGCTTATCCACGAACACGGACAAGAAGTATGAAGGGGTAG | 2532 | 0.408 | MFLDLSFNVFSGGIPSALGNCSGLSLFAAVNSNLEGSIPSSFGLLTKLSILRLPENLLSGKIPPEIGNCKSLNELHLYSNRLEGKIPNDLGKLSELRDLELFSNQLMGEIPLSIWKIQSLEHLLVYNNSLSGELPLEMTELKQMKNISLFNNHFSGVIPQSLGINSSLVQLDFTNNKFTGTIPPNLCFGKKLSLLTMGFNQLQGSIPPDVGSCTTLRRVILKQNNFIGPLPDFEGNPNLTFMDISNNQINGTIPSSLGNCTNLTDLNLSVNKFTGLIPSELGNLVNLRTLILAHNNLEGPLPSQLSHCTKMDEFDVGYNILNGSLPSSLQNWTALNTLILSENHFSGGIPAFLSGFKKLSELRLGGNMFGGRIPGSVGALQNLMYGLNLSSNGLIGDIPVEIGNLKNLQTLDLSQNNLTGRIEVLGELPSLVEINISYNSFHGPVPKMLMKLLNSSLSSFLGNPGLCIRCSPSDDMVCTESSHLKPCDINQKGLSKVQIVMTALGSSIFVVLLLLGLVYIFIFGRKSKQEVNISAIEGSSYLLNKVMEATENLNDRYIIGRGAHGVVYKAPVGPGKAFAVKKLGFAASRGKNLSMVREIQTLGKIRHRNLVKLEDFWLRKDYGLILYSYMPNGSLHDVLHEKIPRPSLEWNVRYKIAVGIAHALAYLHYDCDPPIVHRDIKPSNILLDSDMEPHVADFGIAKLLDQSCTSNPSMSVPGTIGYIAPENAYATANSRESDVYSYGVVLQELITRKKAVNPSFMEGTDVVVWVRSVWSETGEINQIVDSSLAEELLDTHIMENVTKVLMVALRCTEKDPRKRPTMREVTKQLSDAYPRTRTRSMKG* | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops7g00030 | 843 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 630 | 842 | - | - | |
Rops7g00030 | 843 | ProSitePatterns | Protein kinases ATP-binding region signature. | 559 | 582 | IPR017441 | GO:0005524 | |
Rops7g00030 | 843 | Gene3D | Ribonuclease Inhibitor | 1 | 234 | IPR032675 | - | |
Rops7g00030 | 843 | Pfam | Protein kinase domain | 558 | 827 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00030 | 843 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 286 | 830 | - | - | |
Rops7g00030 | 843 | SUPERFAMILY | L domain-like | 2 | 202 | - | - | |
Rops7g00030 | 843 | Gene3D | Transferase(Phosphotransferase) domain 1 | 630 | 842 | - | - | |
Rops7g00030 | 843 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 521 | 629 | - | - | |
Rops7g00030 | 843 | Gene3D | Ribonuclease Inhibitor | 235 | 487 | IPR032675 | - | |
Rops7g00030 | 843 | ProSiteProfiles | Protein kinase domain profile. | 553 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00030 | 843 | FunFam | Leucine-rich repeat family protein | 1 | 231 | - | - | |
Rops7g00030 | 843 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 232 | 329 | - | - | |
Rops7g00030 | 843 | SUPERFAMILY | Protein kinase-like (PK-like) | 533 | 829 | IPR011009 | - | |
Rops7g00030 | 843 | SUPERFAMILY | RNI-like | 147 | 455 | - | - | |
Rops7g00030 | 843 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 356 | 474 | - | - | |
Rops7g00030 | 843 | ProSiteProfiles | Leucine-rich repeat profile. | 407 | 429 | IPR001611 | GO:0005515 | |
Rops7g00030 | 843 | MobiDBLite | consensus disorder prediction | 815 | 843 | - | - | |
Rops7g00030 | 843 | SMART | serkin_6 | 553 | 836 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops7g00030 | 843 | PRINTS | Leucine-rich repeat signature | 239 | 252 | - | - | |
Rops7g00030 | 843 | PRINTS | Leucine-rich repeat signature | 405 | 418 | - | - | |
Rops7g00030 | 843 | Pfam | Leucine rich repeat | 387 | 440 | IPR001611 | GO:0005515 | |
Rops7g00030 | 843 | Pfam | Leucine rich repeat | 237 | 297 | IPR001611 | GO:0005515 | |
Rops7g00030 | 843 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 675 | 687 | IPR008271 | GO:0004672|GO:0006468 | |
Rops7g00030 | 843 | Gene3D | Phosphorylase Kinase; domain 1 | 523 | 629 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops7g00030 | Rops-Chr7 | 529843 | 532476 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops7g00030 | 1 | 840 | Receptor kinase-like Gene Family | AT1G73080 | 54.865 | 0.0 | 891 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Rops7g00030 | Pkinase | 8.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops7g00030 | - | - | gmx:100778035 | 1336.63 |