Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00030 ATGTTTTTGGATCTCTCGTTCAATGTGTTTAGTGGAGGCATTCCCTCAGCCTTGGGGAATTGTAGTGGTTTATCACTATTTGCTGCTGTAAACAGTAACTTAGAGGGAAGTATTCCATCCTCCTTCGGTCTACTGACCAAGCTTTCTATTCTACGCCTTCCTGAGAACCTTTTGTCCGGAAAAATACCTCCAGAGATTGGTAATTGCAAGTCTTTGAATGAGTTACATTTGTATTCCAATCGACTTGAGGGAAAGATTCCAAATGACCTGGGAAAACTAAGTGAACTGCGGGACCTGGAATTGTTTTCCAATCAATTGATGGGTGAAATTCCACTTAGCATCTGGAAGATTCAAAGTCTTGAGCATCTCCTTGTATATAATAATAGCCTTTCCGGGGAACTGCCTTTGGAGATGACAGAGCTCAAGCAAATGAAAAACATCTCACTGTTTAACAACCACTTCTCCGGAGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTAGTTCAGTTGGACTTTACAAATAATAAGTTCACTGGCACCATCCCACCAAATCTTTGTTTTGGCAAGAAGTTAAGCTTGCTGACTATGGGCTTCAATCAACTTCAAGGTAGCATACCTCCTGATGTTGGAAGCTGTACAACTCTTAGAAGGGTCATCCTTAAACAAAATAACTTTATTGGGCCCCTTCCTGATTTTGAAGGCAACCCCAATCTCACATTTATGGACATCAGCAACAACCAAATCAATGGAACAATTCCATCAAGTTTGGGAAACTGCACAAATCTCACTGACTTAAATTTGTCCGTGAACAAATTTACAGGGCTTATACCCTCAGAGCTTGGAAACCTTGTGAATCTTCGGACATTGATTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCATCTCAGCTGTCACACTGTACCAAAATGGACGAGTTTGATGTGGGATACAATATCCTAAATGGTTCACTACCATCGAGTTTGCAGAACTGGACGGCACTAAACACATTAATTTTAAGTGAGAATCATTTTAGTGGGGGCATCCCAGCTTTCTTGTCGGGATTTAAAAAGCTCTCTGAACTACGACTTGGTGGCAATATGTTTGGAGGCAGAATTCCAGGATCTGTAGGAGCGTTGCAAAATTTGATGTACGGGTTGAATCTAAGTTCCAATGGGCTAATAGGTGACATTCCTGTGGAGATTGGAAACCTGAAAAATTTGCAAACACTGGATCTATCTCAGAACAATTTGACAGGAAGAATAGAAGTTCTTGGTGAGCTCCCTTCATTAGTTGAAATCAATATCTCATACAATTCTTTTCATGGGCCTGTTCCAAAGATGCTAATGAAGTTGCTTAATTCTTCCTTGTCATCATTTTTGGGGAATCCTGGGCTATGTATCCGTTGTTCACCATCTGATGACATGGTTTGCACTGAAAGCAGCCATCTAAAACCATGTGATATCAATCAGAAAGGTCTCAGTAAAGTTCAAATTGTGATGACAGCACTTGGATCCTCAATATTTGTTGTTTTGCTGTTGCTGGGATTAGTTTATATTTTTATTTTTGGCAGAAAATCTAAGCAGGAAGTCAATATCTCTGCTATTGAGGGTTCTTCATACCTTCTTAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATCGGTATATCATTGGCAGAGGAGCCCATGGAGTTGTTTATAAAGCCCCGGTTGGTCCAGGTAAAGCTTTTGCTGTAAAGAAGCTAGGATTTGCTGCCAGCAGAGGTAAGAACTTGAGCATGGTCAGAGAGATTCAAACCCTTGGAAAAATTAGGCATCGAAATCTGGTTAAATTGGAAGACTTTTGGTTGAGAAAAGATTATGGTCTAATTTTGTATAGCTACATGCCAAATGGAAGCCTTCATGATGTTTTGCATGAAAAGATTCCACGACCATCCTTAGAGTGGAATGTCCGGTATAAGATAGCTGTTGGAATTGCTCATGCATTGGCTTATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAACCAAGCAACATACTTCTAGACTCTGATATGGAGCCTCACGTAGCTGACTTTGGTATTGCAAAACTTTTGGACCAGTCTTGTACTTCAAATCCTTCCATGTCTGTGCCGGGTACAATTGGTTATATAGCACCAGAGAATGCTTATGCAACAGCAAATAGTAGGGAGTCTGATGTATACAGTTATGGGGTAGTTTTGCAGGAGCTGATAACCAGAAAGAAGGCAGTGAATCCCTCATTTATGGAGGGTACTGATGTGGTGGTTTGGGTTAGATCTGTGTGGAGTGAAACAGGAGAAATTAATCAAATTGTTGATTCAAGCCTTGCAGAGGAATTGCTAGATACCCATATAATGGAAAACGTAACAAAAGTTCTTATGGTGGCTTTGAGATGTACTGAGAAGGATCCACGCAAGAGACCCACAATGAGAGAAGTTACCAAGCAATTATCAGATGCTTATCCACGAACACGGACAAGAAGTATGAAGGGGTAG 2532 0.408 MFLDLSFNVFSGGIPSALGNCSGLSLFAAVNSNLEGSIPSSFGLLTKLSILRLPENLLSGKIPPEIGNCKSLNELHLYSNRLEGKIPNDLGKLSELRDLELFSNQLMGEIPLSIWKIQSLEHLLVYNNSLSGELPLEMTELKQMKNISLFNNHFSGVIPQSLGINSSLVQLDFTNNKFTGTIPPNLCFGKKLSLLTMGFNQLQGSIPPDVGSCTTLRRVILKQNNFIGPLPDFEGNPNLTFMDISNNQINGTIPSSLGNCTNLTDLNLSVNKFTGLIPSELGNLVNLRTLILAHNNLEGPLPSQLSHCTKMDEFDVGYNILNGSLPSSLQNWTALNTLILSENHFSGGIPAFLSGFKKLSELRLGGNMFGGRIPGSVGALQNLMYGLNLSSNGLIGDIPVEIGNLKNLQTLDLSQNNLTGRIEVLGELPSLVEINISYNSFHGPVPKMLMKLLNSSLSSFLGNPGLCIRCSPSDDMVCTESSHLKPCDINQKGLSKVQIVMTALGSSIFVVLLLLGLVYIFIFGRKSKQEVNISAIEGSSYLLNKVMEATENLNDRYIIGRGAHGVVYKAPVGPGKAFAVKKLGFAASRGKNLSMVREIQTLGKIRHRNLVKLEDFWLRKDYGLILYSYMPNGSLHDVLHEKIPRPSLEWNVRYKIAVGIAHALAYLHYDCDPPIVHRDIKPSNILLDSDMEPHVADFGIAKLLDQSCTSNPSMSVPGTIGYIAPENAYATANSRESDVYSYGVVLQELITRKKAVNPSFMEGTDVVVWVRSVWSETGEINQIVDSSLAEELLDTHIMENVTKVLMVALRCTEKDPRKRPTMREVTKQLSDAYPRTRTRSMKG* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00030 843 FunFam Serine/threonine-protein kinase-like protein CCR4 630 842 - -
Rops7g00030 843 ProSitePatterns Protein kinases ATP-binding region signature. 559 582 IPR017441 GO:0005524
Rops7g00030 843 Gene3D Ribonuclease Inhibitor 1 234 IPR032675 -
Rops7g00030 843 Pfam Protein kinase domain 558 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00030 843 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 286 830 - -
Rops7g00030 843 SUPERFAMILY L domain-like 2 202 - -
Rops7g00030 843 Gene3D Transferase(Phosphotransferase) domain 1 630 842 - -
Rops7g00030 843 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 521 629 - -
Rops7g00030 843 Gene3D Ribonuclease Inhibitor 235 487 IPR032675 -
Rops7g00030 843 ProSiteProfiles Protein kinase domain profile. 553 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00030 843 FunFam Leucine-rich repeat family protein 1 231 - -
Rops7g00030 843 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 232 329 - -
Rops7g00030 843 SUPERFAMILY Protein kinase-like (PK-like) 533 829 IPR011009 -
Rops7g00030 843 SUPERFAMILY RNI-like 147 455 - -
Rops7g00030 843 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 356 474 - -
Rops7g00030 843 ProSiteProfiles Leucine-rich repeat profile. 407 429 IPR001611 GO:0005515
Rops7g00030 843 MobiDBLite consensus disorder prediction 815 843 - -
Rops7g00030 843 SMART serkin_6 553 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00030 843 PRINTS Leucine-rich repeat signature 239 252 - -
Rops7g00030 843 PRINTS Leucine-rich repeat signature 405 418 - -
Rops7g00030 843 Pfam Leucine rich repeat 387 440 IPR001611 GO:0005515
Rops7g00030 843 Pfam Leucine rich repeat 237 297 IPR001611 GO:0005515
Rops7g00030 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Rops7g00030 843 Gene3D Phosphorylase Kinase; domain 1 523 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00030 Rops-Chr7 529843 532476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00030 1 840 Receptor kinase-like Gene Family AT1G73080 54.865 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops7g00030 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00030 - - gmx:100778035 1336.63