Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00027 ATGAGCAACAGCATGACAAACATGAACTCATCAACGTCGCGTGGTTCCACCTCATCCTCCAATGGCCTCCTCGCCGTCACCATCGCCAGCAACCACCCTGACGATCACCACAACGACGACGACTTGCTCGCTGATCCCGACGATCCTTTCGACATTACCCACACCAAGAATGCTCCTCCCGAGACCCTCAAGCGTTGGCGACAAGCTGCATTCGTGCTCAATGCGTCCAGGCGTTTTAGATACACTCTTGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCACGCACAAGTCATCAGAGCAGCTCTGCTATTCAGATTGGCTGGTGAACGTGAACTAGTGACAAATACAGTAGTGGCGGCATCCCCAAGTCCAGATGGTAACTTCGCAGTTGGGCTCGAGCAACTTGTTTCGCTGTCTAAGAGTCAGAATATTCCTGCTTTACAACAATATGGAGGGGTTAAAGGCTTATCAAATTTACTAAATTCAAATCCGGATAAAGGGATTAGTGGGGATGATGCTGATCTTTTAAAGAGGAAAAATGCGTTCGGAACCAATACATATCCTAGGAAAAAGGGGAAAAGTTTCTGGAGGTTTCTATGGGAAGCTTGGCAAGATCTGACCCTTATAATATTGATTATAGCAGCTGTGGTGTCATTGGTACTTGGAATAAAAACAGAGGGTTTGGAACAAGGATGGTATGACGGGGGAAGCATTGCTTTCGCAGTTATTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTAAGAACTTGAATGCAGAGAAACAAAATATACAATTGGAGGTCAATAGAGGTGGCAGAACAATAAAAATATCGATATTTGAAATTGTTGTTGGTGATGTAGTGCCCCTTAAAATTGGAGATCAGGTTCCTGCTGACGGAGTTTTAATCACTGGTCACTCACTTGCCATTGATGAATCTAGCATGACTGGTGAAAGCAAAATTATTCACAAGGATTCAAAATCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTGGGTGCTATGCTGGTAATCGGTGTTGGTATAAATACCGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACCGGAGAAGAAACTCCATTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTATAGTTGGGCTTACTGTAGCTGTTTGTGTGCTTGCAGTCCTCTTGGGAAGATACTTTTCTGGCCATACGAAAGATTTAGATGGAAAAGTGCAATTTGTTGCCGGAAAGACAAGTGTTAGCGATGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTAACAATTGTGGTTGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACCTTAACCCTGGCATACTCGATGCGGAAAATGATGGCAGACAAAGCCTTGGTACGAAGGCTATCAGCATGCGAAACTATGGGCTCTGCTACAACAATATGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGCTGGGAGGAAGAAACTAAATCCACCAGATGACTTGTCACAATTGCATCCAGAAGCTTTATCTCTGATAATTGAAGGCATAGCGCAAAATACAACTGGCAATGTTTTCGTGCCTAAGGATGGTGGAGAGGCAGAGGTGTCAGGATCTCCTACAGAGAAGGCAATTCTTTCTTGGGCCGTGAAGTTGGGGATGAATTTTGATGTTGTCAGATCAAATTCAACAATTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCCGTGAAACTGGTGGATTCTGGAGTGCATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGAGCATGTACTCAATTTCTTGATTCAAATGGTCACTTACAATCTATTGAAGAAGATAAGGTATTCTTCAAGAAAGCTATCGATGACATGGCTGCTCAGAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATGAATTGGATAAAATTCCATCTGAGGAGGAGGAATTAGACCAGTGGTCCTTACCAGAACACGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGATGCCGTGAAAGTATGCACTAAAGCTGGCGTGAAGGTACGCATGGTTACGGGCGACAATCTTCAAACAGCAAAAGCAATAGCTTTGGAGTGTGGAATACTGACTTCAAGTGAAGATGCTGTTGAGCCAAATATAATCGAAGGAAAGACATTCCGTCAATTATCTGAAAAGGAAAGGGAACAAGTTGCTAAGAAAATAACGGTGATGGGAAGGTCTTCTCCTAATGACAAGCTTTTGCTGGTGCAAGCACTACGTAAAGGTGGTGAAGTTGTGGCTGTCACCGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGCACTGAAGTTGCGAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCGTCAGTTGTAAAGGTTGTTCGCTGGGGGCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAATGTTGCTGCTCTTATAATAAATGTTGTGGCAGCAATATCTTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGCTCAACCTTATCATGGACACACTTGGGGCTCTTGCACTTGCTACGGAACCACCAACTGATCGCCTTATGAATAGAACCCCAGTTGGCCGAAGGGAACCTCTTATAACGAATATCATGTGGAGGAACTTGCTCGTGCAGGCCATCTATCAAGTGGCTCTTCTTCTCGTTCTTAACTTCTGTGGTGAAAGTATTCTGGGTGATCATGATTCTAGAACGCATACCATACAAGTGAAGAATACTATAATTTTCAATGCATTTGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGAAAACCAGATGAAATGAATGTCTTCCGGGGAGTGACCAAGAACCGTCTGTTCATGGGAATTGTTGGAATGACCTTTGTACTTCAGATAATAATCATCGAGTTCCTTGGAAAGTTCACGTCGACAGTGAGGCTTGATTGGAAGCAGTGGCTTGCTTGTCTTTGTATTGGGCTTATCAGCTGGCCTCTTGCCATGGTTGGAAAATTAATTCCTGTTCCCAAAACACCATTGTCCCGATACTTCTTGAGGACATTCAGGCGATTGAGGAAGTCTCGTACTGCATGA 3279 0.4337 MSNSMTNMNSSTSRGSTSSSNGLLAVTIASNHPDDHHNDDDLLADPDDPFDITHTKNAPPETLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTVVAASPSPDGNFAVGLEQLVSLSKSQNIPALQQYGGVKGLSNLLNSNPDKGISGDDADLLKRKNAFGTNTYPRKKGKSFWRFLWEAWQDLTLIILIIAAVVSLVLGIKTEGLEQGWYDGGSIAFAVILVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVNRGGRTIKISIFEIVVGDVVPLKIGDQVPADGVLITGHSLAIDESSMTGESKIIHKDSKSPFLMSGCKVADGVGAMLVIGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGRYFSGHTKDLDGKVQFVAGKTSVSDAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKLNPPDDLSQLHPEALSLIIEGIAQNTTGNVFVPKDGGEAEVSGSPTEKAILSWAVKLGMNFDVVRSNSTILHVFPFNSEKKRGGVAVKLVDSGVHIHWKGAAEIVLGACTQFLDSNGHLQSIEEDKVFFKKAIDDMAAQSLRCVAIAYRSYELDKIPSEEEELDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKVCTKAGVKVRMVTGDNLQTAKAIALECGILTSSEDAVEPNIIEGKTFRQLSEKEREQVAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAISSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDRLMNRTPVGRREPLITNIMWRNLLVQAIYQVALLLVLNFCGESILGDHDSRTHTIQVKNTIIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTSTVRLDWKQWLACLCIGLISWPLAMVGKLIPVPKTPLSRYFLRTFRRLRKSRTA* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00027 1092 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 824 1072 - -
Rops7g00027 1092 Pfam Cation transporter/ATPase, N-terminus 158 225 IPR004014 -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 9 plasma membrane-type 354 524 - -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 510 707 - -
Rops7g00027 1092 Pfam Cation transporting ATPase, C-terminus 892 1068 IPR006068 -
Rops7g00027 1092 Gene3D - 60 112 - -
Rops7g00027 1092 MobiDBLite consensus disorder prediction 32 61 - -
Rops7g00027 1092 SMART Cation_ATPase_N_a_2 156 230 IPR004014 -
Rops7g00027 1092 Gene3D - 497 852 IPR023214 -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Rops7g00027 1092 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Rops7g00027 1092 CDD P-type_ATPase_Ca_PMCA-like 182 940 - -
Rops7g00027 1092 Gene3D - 510 707 IPR023299 GO:0000166
Rops7g00027 1092 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 90 IPR024750 GO:0005516
Rops7g00027 1092 NCBIfam calcium-translocating P-type ATPase, PMCA-type 146 1070 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops7g00027 1092 NCBIfam HAD-IC family P-type ATPase 773 887 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops7g00027 1092 NCBIfam HAD-IC family P-type ATPase 437 526 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops7g00027 1092 MobiDBLite consensus disorder prediction 30 61 - -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 58 114 - -
Rops7g00027 1092 SFLD C1.7: P-type atpase like 482 859 - -
Rops7g00027 1092 Pfam E1-E2 ATPase 278 478 - -
Rops7g00027 1092 SUPERFAMILY Calcium ATPase, transmembrane domain M 157 1070 IPR023298 -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 700 852 - -
Rops7g00027 1092 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 704 IPR023299 GO:0000166
Rops7g00027 1092 PANTHER CATION TRANSPORTING ATPASE 99 1070 - -
Rops7g00027 1092 PRINTS Sodium/potassium-transporting ATPase signature 243 263 - -
Rops7g00027 1092 PRINTS Sodium/potassium-transporting ATPase signature 619 637 - -
Rops7g00027 1092 PRINTS Sodium/potassium-transporting ATPase signature 493 514 - -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 256 376 - -
Rops7g00027 1092 Pfam haloacid dehalogenase-like hydrolase 497 821 - -
Rops7g00027 1092 SUPERFAMILY Calcium ATPase, transduction domain A 278 373 IPR008250 -
Rops7g00027 1092 ProSitePatterns E1-E2 ATPases phosphorylation site. 502 508 IPR018303 -
Rops7g00027 1092 Gene3D - 208 1063 - -
Rops7g00027 1092 SUPERFAMILY HAD-like 498 912 IPR036412 -
Rops7g00027 1092 SFLD p-type atpase 482 859 IPR044492 -
Rops7g00027 1092 Gene3D - 181 376 - -
Rops7g00027 1092 FunFam Calcium-transporting ATPase 208 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00027 Rops-Chr7 487177 503749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00027 16 1092 Primary Pumps ATPases AT3G21180 76.633 0.0 1684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00027 K01537 - gmx:100817367 1830.07