Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00017 ATGCCAAGGCCTGTTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCATGTGCTTGATGCTCTTTTCCCCTCAGTTCTTGGTGGGACATGTGCCATACCTGGAGCTTTTGGTTGTGGTAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCAAACTCTGATACTGTTGTTTATGTTGGCTGTGGGGAACGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTCCCACAACTTACAATGACATTGCCTGATGGCCGTGAAGAATCTGTCATGAAACGTACCACACTAGTGGCTAACACTTCAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTATACAGGAATCACTTTAGCCGAGTATTTTAGAGACATGGGTTACAATGTCAGCATGATGGCAGATTCAACATCAAGATGGGCAGAGGCATTGCGTGAAATCTCTGGACGGCTGGCAGAAATGCCTGCAGATAGTGGTTATCCTGCATATCTTGCTGCACGTTTGGCCTCCTTCTATGAACGTGCGGGGAAAGTTAAATGTCTTGGAGGTCCTGAACGTACTGGTAGTGTCACAATTGTTGGAGCTGTTTCTCCACCTGGAGGAGATTTTTGTGACTTCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAACTCGCTCAAAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCTTATTCGAAGTACTCATCGATTTTATAAACATCAGGACAAAGGCTCGTGAAGTGCTGCAAAGAGAAGATGATCTGAATGAAATTGTCCAGCTTGTAGGTAAGGATGCCTTAGCTGAAGCAGACAATATTACTTTAGAAACTGCAAAGCTTTTAAGAGAGGATTATCTTGCTCAAAATGCTTTTACACCATATGACAAATTCTGTCCCTTCTACAAGTCTGTTTGGATGATGCGCAACATTATCCATTTCTACAATTTGGCAAATCAGGCAGTAGAGAGAGGAGCTGGTACAGATGGTCAGAAGATAACTTATAGCCTCATCAAGCATCGACTGGGGGAAAAACAATGTTATCAAAATGGAACAGCCATGGTCCTATTTTTTGGACGGTGTTCTAAATGA 1116 0.431 MPRPVASKLAADTPLLTGQHVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFCDFCNPQHSSGFLGFGQKTRSKEAFSFCELAYFLFEVLIDFINIRTKAREVLQREDDLNEIVQLVGKDALAEADNITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYSLIKHRLGEKQCYQNGTAMVLFFGRCSK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00017 371 FunFam V-type proton ATPase catalytic subunit A 234 359 - -
Rops7g00017 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 210 IPR027417 -
Rops7g00017 371 CDD ATP-synt_V_A-type_alpha_C 247 351 - -
Rops7g00017 371 Gene3D - 237 362 IPR024034 -
Rops7g00017 371 CDD V_A-ATPase_A 2 208 - -
Rops7g00017 371 Gene3D - 1 216 IPR027417 -
Rops7g00017 371 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 2 353 IPR022878 GO:0046034|GO:0046961
Rops7g00017 371 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 246 326 - -
Rops7g00017 371 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 18 210 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00017 Rops-Chr7 325422 335858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00017 2 352 Primary Pumps ATPases(2) AT1G78900 85.205 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00017 K02145 - vvi:100266369 602.438