Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00015 ATGCCAGCGGTTTACTACGGAGCTCGTTTGACCACCTTCGAAGACTCCGAGAAGGAGAGCGAGTACGCTGTTTCAGGACCAGTGGTGGTTTCTGATGGCATGGCTGGGGCTGCCATGTATGAACTGGTCCGTGTCGGTCGTAATAACTCATCGGTGAAATCATTCGTTTGGAAGGCGATTCTGCTACTATTCAAGGTCTTCTTCCACACATCTCAATTCTCCTTGATATCACTGCTGCAGTATACACGATATGATCCTTTTTGTTTACCTTCATTTTCAGTCTACGAGGAAACAAGCCTTTGTCTGTGGAGTTGGGGCCTGGAATATTGGGCAATATTTTTGATGGCATTCAGAAGGCCGTTGAAAACTATTGCTAAAAGATCCGGTGATGTCTACATTCCTCGTGGTGTATCTGTTCCAGCACTCGACAAAGATACACTATGGGAGTTTCAGCCTAAAAAAATTGGTGAAGGAGACCTATTGACTGGTGGAGATCTATATGCTACTGTGTTTGAGAACAGTCTAATGCAACACCATATCGCTTTTCCTCCTGATGCCATGGGAAAAATTACTTACATTGCACCACCTGGTCAATATTCCTTGAAGGATAATGTATTGGAACTTGAGTTTCAAGGTGTAAAAAAGAAATTCACCATGCTTCAGGCTTCTTGCTTTTTTGAAGTTTCAGTTTTCCATATGTTATCCTACATTACAACTTAG 720 0.4278 MPAVYYGARLTTFEDSEKESEYAVSGPVVVSDGMAGAAMYELVRVGRNNSSVKSFVWKAILLLFKVFFHTSQFSLISLLQYTRYDPFCLPSFSVYEETSLCLWSWGLEYWAIFLMAFRRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMQHHIAFPPDAMGKITYIAPPGQYSLKDNVLELEFQGVKKKFTMLQASCFFEVSVFHMLSYITT* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00015 239 FunFam V-type proton ATPase catalytic subunit A 146 217 - -
Rops7g00015 239 Gene3D - 118 222 IPR027417 -
Rops7g00015 239 Gene3D - 146 217 - -
Rops7g00015 239 Gene3D - 20 50 IPR023366 -
Rops7g00015 239 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 13 49 IPR022878 GO:0046034|GO:0046961
Rops7g00015 239 Pfam ATPsynthase alpha/beta subunit N-term extension 118 221 IPR031686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00015 Rops-Chr7 323979 325373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00015 1 222 Primary Pumps ATPases(2) AT1G78900 57.965 3.04e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00015 K02145 - gmx:100775727 263.848