Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00010 ATGGAGCCTGGTCTTATGCGGAGCAAGTGCGTGGTCACCACATTCACAAAGGCTGAACCTGAATTTAGAGTTCATCATTATGAGAAAAGAAGAACAAATTCCAATTGGCGTCGTCGTTGTGCACTCTCCGTGCCTGAATGGGAACTTCAGGAAGGTCGTATGGCTGTTTCAATTCTTCTTCAACAATTGGGAGTGTCGGAGGAGGAATCGCTATCCATCGCATCAAACTCACCCGCTTATCTCAACATGTTGGTGGAAGGGGTCAGGGAATTGGAACAGCTCTGGGATTCCGATTCCGAGCCCGATGGCTTCAACTTCAGGGACAAGCTTCTTCGCATTGCTGCTGAGAAAGGTGACAAGGGCAAAATTGCCTTCTTAGAGAGTCTCGGCTTCTCTCTCTCTTCCTCCATGAGTGTCGCAAGGTATCTATCCCCCTCTGATACCCTCCCATCTCTCATACACAAGGTCACATCCATCAAGCAACTCTTCTTTCCTCATTCTCATTCTCATCACTTCCTTGTCAAAAATATTCGCCGCATGATGCGCCACTTATCCATTTCGATTGATGAAGATCTACAACACACTTTGTCCTTCTTCGAAAAGGTTGAAGCAAGGCGCGGAGGTCTTAACATTTTTGCTTCCAAAGATGCCGTTTTCCGTTACTTGATTGAATCATTTCCTCGTCTACTTTTGTTATCTGTAGACAATCACATGAGACGTATGGTGGATTTTCTCCAGAATTTTGGAATCCCCAGAAATCGCATCCCAGACATAATGTTGGCTTTTCCTCCTATCCTGCTCTGGAATCTTCAAGTCCTTAAAACCAGAGTCCTAGCCTTGAAGGAGATTGACGTGGTGGATAAAGATTATGCCAAGTTGGTGCTAAAATATCCGTGGGTTCTATCTACGAGCATTCAAGAGAACTATATGGAGGTCCTTGACTTTCTATATTCTGTGAAGGTTCCAGAGACATGGATAGACCATGCAATCAAAGGCCAACCGTATCTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTGGATCAGTTTGCTGAACTAGGAGTTCGAGGCAAAAAGATGGATCAGGTTATTGCTAAAAGTCCTCAGCTACTATTACAGAAGCCCAAAGACTTTCTACAAGTTGTTGTGTTCTTTGAAAATATAGGTTTTGATAAAGAAACTATTGGGAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTGCTAGTATTAGTAAAACTCTACAGAGGAAGATTGAGTTCCTTAGTGGGGTTGGTGTTTCTAAAACTTACCTTCCTGTGGTTATCAGAAAGTATCCAGAATTACTTGTGTCCGACATCGACAAAACTTTACTACAACGGATAATGTACTTGATGAAGTTAGGACTTTCAGAGAAGGATATTGCATTTATGGTACGTACATTTTCTCCTCTACTTGGGTACAGTATAGAGGAGGTTCTGAGGCCAAAAGTAGAATTCCTGGTGAGCTCAATGGAGAGGCCAGTAAGAGATGTGGTGGGCTACCCTAGGTATTTTAGTTATTCATTAGAAAAGAAGATAAAGCCAAGATATTGGGTGCTGAAAGGAAGGAATATCGAATGTAGCTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATTTATGGGTGTTGGAAGCATGCTCGTCTGTCCTCCTCCGTCATCTTATGATCGCTTCTGA 1710 0.4292 MEPGLMRSKCVVTTFTKAEPEFRVHHYEKRRTNSNWRRRCALSVPEWELQEGRMAVSILLQQLGVSEEESLSIASNSPAYLNMLVEGVRELEQLWDSDSEPDGFNFRDKLLRIAAEKGDKGKIAFLESLGFSLSSSMSVARYLSPSDTLPSLIHKVTSIKQLFFPHSHSHHFLVKNIRRMMRHLSISIDEDLQHTLSFFEKVEARRGGLNIFASKDAVFRYLIESFPRLLLLSVDNHMRRMVDFLQNFGIPRNRIPDIMLAFPPILLWNLQVLKTRVLALKEIDVVDKDYAKLVLKYPWVLSTSIQENYMEVLDFLYSVKVPETWIDHAIKGQPYLLGCSTSKLKLMVDQFAELGVRGKKMDQVIAKSPQLLLQKPKDFLQVVVFFENIGFDKETIGRILARCPEIFAASISKTLQRKIEFLSGVGVSKTYLPVVIRKYPELLVSDIDKTLLQRIMYLMKLGLSEKDIAFMVRTFSPLLGYSIEEVLRPKVEFLVSSMERPVRDVVGYPRYFSYSLEKKIKPRYWVLKGRNIECSLKDMLGKNDEEFAAEFMGVGSMLVCPPPSSYDRF* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00010 569 Pfam mTERF 242 548 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 PANTHER CGI-12 PROTEIN-RELATED 454 552 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 Gene3D Transcription termination factor 3, mitochondrial 347 556 IPR038538 -
Rops7g00010 569 FunFam Mitochondrial transcription termination factor family protein 342 555 - -
Rops7g00010 569 SMART mt_12 256 286 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 397 428 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 362 392 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 433 464 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 469 501 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 502 533 IPR003690 GO:0003690|GO:0006355
Rops7g00010 569 SMART mt_12 327 357 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops7g00010 mTERF 5.5e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00010 K15032 - gmx:100802127 758.059