Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00009 ATGTGGCTTCCAAATCCTAAGGCGTCAGGGAATAAAAAGGGAGGAGGAGGAAATGGATTGGTGGCGGTTGCTATAGATAAGGATAAAGGAAGCCAGTATGCTCTTAAATGGGCCGCTGATACTCTTCTTACCAGAGGCCAAACCGTTGTTCTAATCCACGTTTTGCATGGCACATCCCCACCTGTTTCCAGAGGTACCGAGGCTTTTGTAGGTAACATCAACAATTCAACTGCATCTCCACAGAGACACAAACTTGATAACTCTACCAAGGATCTCTTTCTTACCTTCCATTGCTATTGTACACGCAAAGATATACATTGCCTTGATGTCCTGCTTGAAGGCACTGATGTTGTGAAAGCAATAACAGAATATGTCTCTCATGCGGCAATTGAAAATTTGGTGGTGGGTGCACATTCGAGGCACGGATTTATCAGGTTTAAGTCATCACATACACCAAGCAGCATATCCAAGGGGACACCGGATTTCTGTACCGTTTATGTCATTTCTAAGGGGAAAATCTCCTCGGTTCGAAATGCTTCTCGTCCAGCCCCACATACCTCCCCACTTCTGAGTCACATACATGATTCAAATAACCAGGACGTATGTCAACCTGAGATATGCTCAAGACGTGTGAATTTGAGAGACAGGACATCAATCAAACCTCATGGCTGGCTGGATGAATCTATTAAGTCTCCATTTGGACGAGGAAGAGGTATGAGTGGAATGTCATGCTTGGACTTCCCAGAATCAGATACAGACATATCATTTGTAAGCTCTGAGAGGCCAAGCAGTGGATGTTCATCCTCTATTTATGACTGCATGGACTCAGGCCGAACTTCACGAGTTTCTACCAGTTCAGATCGTAGCTTTGGATCAACCCGATTGGGACTCAAGTTCACTGACCCCAGCTCACCAGATATGTCATTTTCACAGGAAAGCAGTAGAACCTCATTTTCATATTCATCTCAGAACACGGATGAAGTAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAAAGCAAACAATGGAAATGTACAGTACAGCATGCAGAGAAGCACTTACAGCACAACATCAGTTAATAGAGATGAGCAACTGGAGAATTGAGGAAGAAAAAAAATTAGAAGAGGCACGATTGGCCCAGGAAGCTGCGATGGCAATTGCAGAGAAAGAAAAAGCAAGAGGTAAGGCAGCCATTGAAGCAGCTGAAGCAGCTAAAAAAATTGCAAAGGTGGAATCACATAGAAGAGAAAGTGTTGAAGGTAAAGCTGTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGATAATCTTGCCCAAACTGACGTAAGATACAGGAGATACACTATTGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCTCAAAAAATCGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGCGGCTGTCAAGGTTTTACGTCCAGATGCTGCTCAGGGAAAGTCACAGTTTCAGCAAGAGGTTGACATACTAAGCTGTATGCGCCACCCCAACTTGGTGCTTCTTCTAGGAGCTTGTCCGGAGTATGGCATATTGATATATGAATATTTGGCGAATGGAAGCTTAGAAGATTGTCTCTTTCAAAAAAAGAACAACAGGGTTCTGTGTTGGCAGCTCAGGTTCCGAATTGCCGCAGAAATAGCCACCGGCTTACTATTCCTCCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATTTGAAACCAGGCAACATCTTGCTAGACCAGAATTATGTAAGTAAGATAAGTGATGTCGGGTTGGCAAGACTTGTCCCTGTGGTAGCTGAAAATGTGACACAGTGCTGCATGACATCAGCAGCTGGAACTTTCTGCTATATTGATCCAGAGTATCAGCAAACAGGAGTGCTTAGTGTCAAGTCCGATGTTTATTCCTTGGGGATCATGTTTCTACAATTATTGACAGGCAGGGCTCCAATGGGATTGGCTCACCATGTTGAAGAGTGTTTAGAGAAGGGCACATTGGTGGAAATGCTGGACCCATCTCTCACTGACTGGCCTCTTGAAGAAGCCTTGTGCCTTGCAAATATAGCAAGCAAATGTGTACAGCTCAGGCGAAAAGATCGGCCAGACCTTGGGAATGAAGTGTTGCCAGTGCTCAATAAACTGAGAGATTTTGCGGAAGAAAAGATGGGTCCCATCCTCTTAGGAGGCGCTGGTAGTACTGCGCCTTCTCCCATCCAGAGTCAAGCTTCCGTGCAACAGGATGTGATGAGCGACCCACAGCTTGAACATTCAGGAAGCTCAAGAAGTGCATCAACTGCATCAACGTCGACAGAAGCACAACCTTGA 2355 0.4488 MWLPNPKASGNKKGGGGNGLVAVAIDKDKGSQYALKWAADTLLTRGQTVVLIHVLHGTSPPVSRGTEAFVGNINNSTASPQRHKLDNSTKDLFLTFHCYCTRKDIHCLDVLLEGTDVVKAITEYVSHAAIENLVVGAHSRHGFIRFKSSHTPSSISKGTPDFCTVYVISKGKISSVRNASRPAPHTSPLLSHIHDSNNQDVCQPEICSRRVNLRDRTSIKPHGWLDESIKSPFGRGRGMSGMSCLDFPESDTDISFVSSERPSSGCSSSIYDCMDSGRTSRVSTSSDRSFGSTRLGLKFTDPSSPDMSFSQESSRTSFSYSSQNTDEVEADMRRLKLELKQTMEMYSTACREALTAQHQLIEMSNWRIEEEKKLEEARLAQEAAMAIAEKEKARGKAAIEAAEAAKKIAKVESHRRESVEGKAVKEAEEMRKLLDNLAQTDVRYRRYTIEEIEAATNFFSESQKIGEGGYGPVYKCYLDHTPAAVKVLRPDAAQGKSQFQQEVDILSCMRHPNLVLLLGACPEYGILIYEYLANGSLEDCLFQKKNNRVLCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPVVAENVTQCCMTSAAGTFCYIDPEYQQTGVLSVKSDVYSLGIMFLQLLTGRAPMGLAHHVEECLEKGTLVEMLDPSLTDWPLEEALCLANIASKCVQLRRKDRPDLGNEVLPVLNKLRDFAEEKMGPILLGGAGSTAPSPIQSQASVQQDVMSDPQLEHSGSSRSASTASTSTEAQP* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00009 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 168 - -
Rops7g00009 784 Pfam Protein kinase domain 460 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00009 784 SUPERFAMILY Protein kinase-like (PK-like) 442 713 IPR011009 -
Rops7g00009 784 Gene3D Phosphorylase Kinase; domain 1 437 531 - -
Rops7g00009 784 PANTHER OS02G0152300 PROTEIN 21 775 - -
Rops7g00009 784 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 431 531 - -
Rops7g00009 784 Pfam Universal stress protein family 21 147 IPR006016 -
Rops7g00009 784 CDD STK_N 20 171 - -
Rops7g00009 784 ProSiteProfiles Protein kinase domain profile. 459 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00009 784 MobiDBLite consensus disorder prediction 738 784 - -
Rops7g00009 784 SMART serkin_6 459 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g00009 784 FunFam Os07g0541700 protein 532 624 - -
Rops7g00009 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Rops7g00009 784 Coils Coil 325 345 - -
Rops7g00009 784 Coils Coil 371 405 - -
Rops7g00009 784 Gene3D HUPs 21 169 IPR014729 -
Rops7g00009 784 MobiDBLite consensus disorder prediction 743 784 - -
Rops7g00009 784 Gene3D Transferase(Phosphotransferase) domain 1 532 733 - -
Rops7g00009 784 MobiDBLite consensus disorder prediction 276 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00009 Rops-Chr7 196715 201335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00009 1 763 Receptor kinase-like Gene Family AT1G78940 57.814 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops7g00009 Pkinase 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00009 - - gmx:100801601 1102.04