Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00004 ATGCAGCTTGTGTTACTCAAGAGATTGAAGAAACGAAAGTTGAAGAGAAACCACTGTGTCGGCGGTTGCGCTAGTGTTGGTGCCGGTGGTATTGGTTCTACAAGCATAGAGGTTGAGAAAAGACCAGATGGAACATTCGAGGAGACAAGTCGTCGATCGCGGGCGTTGATAGTCGGGGTTCCATTCCGATTCTATTTAGCAATTTCGAACTTTTGTGGGGTCTGCACCCGATTGTTCACCGTTTTAGCTGAACTGCTAATTGATGGTGGGATCCTGAAACATTTTTTAGAAATGCAATATTTGGTTGGTAAAGCAAATGTGAAGAATAAAGAAGATGAAACTACAGGCACACATTCCAGGGAAGATATCAGGGCAGGCGTTTTTCCACACTCAACAATCAATATGGACCCTGAATTTCTTAGAGCTCGTTCTTTTATGCAAGAGAAGATATGTAATATACTATTACAGCGGTACCAGCATCCAGTTGCAGAAGTACATAGAAGGAAGGTTAAGGATCTTGCAAAACGCCTGGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGACTACATGAACTTGGATACACTAGAGAGTCGTTTGTCTAATTTCCTTAGAGGATCATCTAATATTCAAACACAACATCCACAGCTTGTTAGCTCTTCTCCAGTTGGTACACTGATCCCAACCCCTGGTATGTCTCATATTACAAATTCAACCATGATCATAGCATCTTCTGTGGATGCCTCAATAATTGCTGCCAGTGGGTGTAATAGCATGGCATCCACATTTGTCAATAGTCTAAACATGTTACCAGCAGGTAGCATGCTTGACAGTTCCTTGAATAGTTCTGATGGTTTGTCTAATGGTTCCCAGCAGTCTTCTACAAATTTTTCCATTGGCTCAGGAGGAAACATGTCATCAGCGGGGGTGCAAAGAATTGCAAGCCAGATGATTCCCACTCCTGGAGTTAGTGTCAGCAATAATCATTCATATATGAATATAGATCCTTCAACTGATAGCAGTGTCTTTTCCGGTGTTGATTCTACATTGGTATCACAGTCACAGTCACAGTCACAGTCACAGCAGCAGCAGAAGCTGCATGTCAGTGGCCACAGCAATCTTGTATTGCAGAACCTTGGCAGTCAAATGGGTAGTGGAATGATATCTGGCGCACTACAAAAATCTTTTGCACATCCAAATGGTTCTATGAATGGTGGGCTAGGTATTGGAAACAACATACAACTTGCAAATGAACCTGGCACTGATGACTATCCCTCAACATACGGCAATTCCCCTAAACACTTGCAGCAACACTTTGATCAAAATCAGCAACCAGTAGCACATGGTGATGGATATGGATTGAATGATGTTGACACTTTTGCTTCTGGAAATTTTTATGCATCTACGACATCTTCTGGTTCTATGATGAACACCCAGAACATGAATTCAGTAAAATTGCCATCAATACCCAAAACCAGCTCACTGTTAAGTCGTCACTCGAATTTGCATAGTATGCATCAGACTGCTCATCAAAAGTCTCAAGCAATTAATCCATTGGAAAATTTAACTTTGAAATCTTCAAGAGATGGCCTTGTGAATACTCAACAGCAGTATCATCAAGGACCCCAACAATTTCAACAGTCAGAGCAGTATGCTCAACAGCAATTTCAGCCAAAGCTGCAATGTCAGCAACCTCAGCATTTGGTCAATGGTGATGCTTTCTCTCTGTCTCAGCTCTCTTCCAATCCAGACAATCGAGTGAAGTCTGAGCCTGGAGTTGAACAGCATAAAGAAGTTCACAATTCTCACATTTCTGAACAGTTCCATTTATCTGAGATGCAGAACCAGTTACAGCAGAACTCTTTGGAAGATTGCTCTAGGGTTGCTCAACATCTTTCTTTTTCTTCTAGTCTGCATGATTTATCCTCATCAAAATCTCAAATTTCCCAGCAAATGTTGCACCCACATCAATTGGTTTCAGAGTCTCAAAATAATTTGTGCACTCTTTCAGTTGGGTCACAGTCCAAATTCATACTTCTAAATCAATGGCCTCAATCACAAGATGGAAACCACATTCCTGGGAATATGTCACATGAGCAGCAATTCCACATGGATTTTCATCAAAGAATATCAGGGCAAGGTGAAGCTCAATGCAATAATTTATCGTCAGACGGATCTATTATTGGTCAAGCTGTTGCTTCTAGAGGCTCAGCTGAGCTGCTAGACTCAAGCATTATTATCAAGAAGGCACACAGGAATCAACAGAGGTGGCTTTTATTTTTGCTTCATGCTCGACGATGTTCTGCCCCAGAAGGGCGGTGCCAAGAACGCTACTGTTCTAGTGCACAAAAGTTATGTAATCACATAGATGGATGCACTCTACTTCGTTGCCCATATCCTCGTTGTCATCATACCAGGGAATTGCTTCGTCATTTCATAAAATGCAAGGATCCATGTTGTCCTGTTTGTGTTTTGGTAAGAAAGTATCGACGTGCATTTCAACTTAAGCCCCAGATTCGGCCAGATCCTGAATCAGGTTTGCCAATTACTTTCAATGTATCCTGTAAATCCTATAATATAGTAAGCCCATCACCTAGATTGATCTCAAAGTCTCCGTTAGTGGTTGAAACTTCTGAAGACCAGCACCCATCTCTAAAACGTATGAAAATTGAGCAGTGCACCCAGTCCATTAATCCTGAATATGACAATTCTGCTTCCTCTGTTCCTCTAAAGTCTGAATCACGAGATCCCAAGGATACCCGGTGCCAGGCCTTTCCCTGTGGTGACATGTCTATGTCAAATAAATCTGAGCTTACAGAAGTTAAGGCAGAAGTTCTGGTGCATTCAGTACATGAAAATCTTACTGAGATGAAAATGGATGAAGATAATGCAGATGATAAAAGGCATGCTGGTGAGCCTGTCTCATATGATGAGCCTGCTAATATAGCTAGGCCAGAAAATATTAAAACTGAGAAAGAAACTGGTCAAGATAAGCAAGAAAATGCTACTGTGCCGTTTGAAATTGCAACTGGAACCAAGTCTGGTAAGCCAAAAATAAAGGCGGTCTCATTGACTGAGCTATTTACTCCAGAGCAAGTCAAGGAACATATCATTGGCCTCAGGCGATGGATTGGCCAAAGCAAATCAAAAGCAGAGAAAAATCAAGCAATGGAACATTCAATGAGTGAGAACTCCTGTCAATTGTGCGCTGTAGAGAAGCTTACTTTTGAACCACCGCCTATTTATTGCACAACGTGTGGTGTTCGCATTAAACGAAATAATATGTATTATACCATGGGTACTGGTGATACACGGCATTATTTTTGTATTCCCTGCTATAATGAGCCTCGTGGAGACACCATTGCTGTTGATGGGACTCCCTTTCCCAAGTCAAGGTTGGAAAAAAAGAAAAATGATGAGGAAACGGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACATCAAATTTGTGCTTTATTTAATGGTCGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGTTATATTCAAGAAGTAGAAAGAGGTGAGCGTAAGCCTTTACCCCAAAGTGCTGTTCTTGGAGCCAAGGATTTGCCGAGAACAATTCTCAGTGACCACATAGAGCAACGATTATTTAGGCGACTAAAACAAGAAAGACAAGAGAGGGCCAGGCATCAAGGGAAAAGTCATGATGAGGTGCCTGGTGCTGAAGCACTTGTTGTAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTTAAACAGCGGTTTCTGGAGATTTTTCAGGAAGAAAATTACCCAGCAGAATTCCCATATAAATCGAAGGTGGTTTTATTGTTTCAGAAAATTGAAGGTGTGGAAGTCTGCCTCTTTGGCATGTATGTTCAAGAATTTGGATGTGAATGCCAATTTCCTAATCAGCGTCGGGTTTATCTTTCGTATCTGGATTCTGTCAAGTATTTTAGGCCTGAGGTTAAAGCAGCGAGTGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAGTATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCATGTCCTCCATTGAAGGGTGAAGATTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTACCTGTCCATGTTAAGAAAAGCTGCCAAGGAGAATATTGTAGTTGATCTCACCAACTTATACGACCATTTCTTTGTATCTACCGGTGAATGTAGGGCTAAGGCTACAGCCTCAAGGCTACCATATTTTGATGGTGACTACTGGCCTGGTGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAGGATGGAAGGAAACAAAATAAGAAAGGAACAACCAAGAAGACCATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCTGATCTTTCTGGAAACGCCTCAAAAGATCTGCTCCTAATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAAGATTTCATCATGGTTCATTTGCAGCATGCATGCACTCATTGTTGTATTCTAATGGTGTCTGGCAACCGTTGGATTTGCAACCACTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACTAAAGCGTGAAGAGAGAGAACGGCATCCAATTAATCAGAGGGAGAAACACACCCTTTATCCTGTTGAAATTACTGATGTACCTGCTGATACTAAGGACAAAGATGAGATTCTTGAGAGTGAATTCTTTGACACCAGACAAGCATTTCTGAGTCTTTGCCAGGGAAATCATTATCAATACGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTTCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTACAACATGTAATGTATGCCGTCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAACGCTTGTTATCAAAAGGATGGAGGCACTGATCATCCTCATAAATTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACACAGAAGCCAGGCAACTTCGAGTATTACAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAAGGGCTTTTCCGTCATGGAATGTATTGCAAAACACGTGCTCCTGGAGGCTGTGTTCTTTGCAAGAAAATGTGGAATTTGCTTCAACTTCATGCTCGTGCTTGCAAGGAATCTGCGTGCCATGTACCACGTTGCAGGGATTTAAAAGAACATTTAAGGAGATTGCAGCATCAGTCTGAGTCACGGCGAAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCCGGATAA 5448 0.4178 MQLVLLKRLKKRKLKRNHCVGGCASVGAGGIGSTSIEVEKRPDGTFEETSRRSRALIVGVPFRFYLAISNFCGVCTRLFTVLAELLIDGGILKHFLEMQYLVGKANVKNKEDETTGTHSREDIRAGVFPHSTINMDPEFLRARSFMQEKICNILLQRYQHPVAEVHRRKVKDLAKRLEEGMLKAALSKEDYMNLDTLESRLSNFLRGSSNIQTQHPQLVSSSPVGTLIPTPGMSHITNSTMIIASSVDASIIAASGCNSMASTFVNSLNMLPAGSMLDSSLNSSDGLSNGSQQSSTNFSIGSGGNMSSAGVQRIASQMIPTPGVSVSNNHSYMNIDPSTDSSVFSGVDSTLVSQSQSQSQSQQQQKLHVSGHSNLVLQNLGSQMGSGMISGALQKSFAHPNGSMNGGLGIGNNIQLANEPGTDDYPSTYGNSPKHLQQHFDQNQQPVAHGDGYGLNDVDTFASGNFYASTTSSGSMMNTQNMNSVKLPSIPKTSSLLSRHSNLHSMHQTAHQKSQAINPLENLTLKSSRDGLVNTQQQYHQGPQQFQQSEQYAQQQFQPKLQCQQPQHLVNGDAFSLSQLSSNPDNRVKSEPGVEQHKEVHNSHISEQFHLSEMQNQLQQNSLEDCSRVAQHLSFSSSLHDLSSSKSQISQQMLHPHQLVSESQNNLCTLSVGSQSKFILLNQWPQSQDGNHIPGNMSHEQQFHMDFHQRISGQGEAQCNNLSSDGSIIGQAVASRGSAELLDSSIIIKKAHRNQQRWLLFLLHARRCSAPEGRCQERYCSSAQKLCNHIDGCTLLRCPYPRCHHTRELLRHFIKCKDPCCPVCVLVRKYRRAFQLKPQIRPDPESGLPITFNVSCKSYNIVSPSPRLISKSPLVVETSEDQHPSLKRMKIEQCTQSINPEYDNSASSVPLKSESRDPKDTRCQAFPCGDMSMSNKSELTEVKAEVLVHSVHENLTEMKMDEDNADDKRHAGEPVSYDEPANIARPENIKTEKETGQDKQENATVPFEIATGTKSGKPKIKAVSLTELFTPEQVKEHIIGLRRWIGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIAVDGTPFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARHQGKSHDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPAEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGCECQFPNQRRVYLSYLDSVKYFRPEVKAASGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDLTNLYDHFFVSTGECRAKATASRLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTHCCILMVSGNRWICNHCKNFQICDKCYEAELKREERERHPINQREKHTLYPVEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNVCRLDIETGQGWRCEVCPEYDVCNACYQKDGGTDHPHKLTNHPSMADRDAQNTEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMYCKTRAPGGCVLCKKMWNLLQLHARACKESACHVPRCRDLKEHLRRLQHQSESRRRAAVMEMMRQRAAEVANNAG* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00004 1815 MobiDBLite consensus disorder prediction 900 920 - -
Rops7g00004 1815 Pfam Zinc finger, ZZ type 1639 1680 IPR000433 GO:0008270
Rops7g00004 1815 FunFam Histone acetyltransferase HAC1-like protein 1694 1811 - -
Rops7g00004 1815 Pfam TAZ zinc finger 756 824 IPR000197 -
Rops7g00004 1815 Pfam TAZ zinc finger 1707 1777 IPR000197 -
Rops7g00004 1815 SUPERFAMILY TAZ domain 1699 1782 IPR035898 -
Rops7g00004 1815 ProSiteProfiles Zinc finger ZZ-type profile. 1517 1580 IPR000433 GO:0008270
Rops7g00004 1815 ProSiteProfiles Zinc finger TAZ-type profile. 747 827 IPR000197 -
Rops7g00004 1815 MobiDBLite consensus disorder prediction 348 369 - -
Rops7g00004 1815 Gene3D TAZ domain 1694 1811 IPR035898 -
Rops7g00004 1815 SMART TAZ_2 749 827 IPR000197 -
Rops7g00004 1815 SMART TAZ_2 1700 1778 IPR000197 -
Rops7g00004 1815 SUPERFAMILY RING/U-box 1497 1570 - -
Rops7g00004 1815 MobiDBLite consensus disorder prediction 281 303 - -
Rops7g00004 1815 MobiDBLite consensus disorder prediction 576 601 - -
Rops7g00004 1815 Gene3D - 1513 1572 IPR043145 -
Rops7g00004 1815 ProSitePatterns Zinc finger PHD-type signature. 1110 1181 IPR019786 -
Rops7g00004 1815 SMART KAT11_2 1232 1529 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops7g00004 1815 MobiDBLite consensus disorder prediction 412 436 - -
Rops7g00004 1815 Gene3D - 1636 1688 IPR043145 -
Rops7g00004 1815 SUPERFAMILY RING/U-box 1618 1686 - -
Rops7g00004 1815 CDD PHD_HAC_like 1109 1181 - -
Rops7g00004 1815 FunFam Histone acetyltransferase HAC1 1636 1687 - -
Rops7g00004 1815 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1199 1635 IPR031162 GO:0004402
Rops7g00004 1815 Pfam Histone acetylation protein 1239 1459 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops7g00004 1815 FunFam Histone acetyltransferase of the CBP family 12 1513 1572 - -
Rops7g00004 1815 ProSitePatterns Zinc finger ZZ-type signature. 1642 1669 IPR000433 GO:0008270
Rops7g00004 1815 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1134 1182 IPR013083 -
Rops7g00004 1815 SMART zz_5 1516 1560 IPR000433 GO:0008270
Rops7g00004 1815 SMART zz_5 1636 1682 IPR000433 GO:0008270
Rops7g00004 1815 Gene3D TAZ domain 747 832 IPR035898 -
Rops7g00004 1815 ProSiteProfiles Zinc finger TAZ-type profile. 1697 1780 IPR000197 -
Rops7g00004 1815 Pfam PHD-finger 1140 1182 IPR019787 -
Rops7g00004 1815 SUPERFAMILY FYVE/PHD zinc finger 1143 1183 IPR011011 -
Rops7g00004 1815 PANTHER CBP/P300-RELATED 169 499 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops7g00004 1815 SUPERFAMILY TAZ domain 752 831 IPR035898 -
Rops7g00004 1815 ProSiteProfiles Zinc finger ZZ-type profile. 1637 1690 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00004 Rops-Chr7 96301 132204 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Rops7g00004 HAT_KAT11 1.8e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00004 K04498 - gmx:100800511 2732.59