Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03637 ATGGGTTGTTTTTCGTGTTTCGATTCGAAGGAGGATGAGAAGCTCAATCCTAACCCTCAGCAGGAAACCCATCATCATCATCATGATCACGATCGTGATCATAACCACCCCTCTCATATTTCCAGATTGCCCTCCGCCTCTGGAGGAGCAGACAAGCTACGCTCAACAACAAGTAATGGAGCCTCTAAGAGGGAATTGCCTGTTCTCAAGGACGGACCCCCTGTCCAAATTGCTGCTCAAACTTTCACTTTCCGTGAACTTGCAGCCGCCACCAAAAATTTCAGGCCTCAGTCCTTTATAGGGGAAGGTGGCTTTGGAAGGGTCTACAAGGGCCGACTCGAAACCACCGGTCAGGTTATTGCTGTTAAACAGTTAGACAGAGATGGTCTCCAAGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTGCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGACCAGCGCCTCCTGGTTTATGAATTTATGCCATTGGGATCATTGGAAGATCACCTTCACGATCTTCCCCCTGATAAGGAGCCGTTAGATTGGAACACTAGGATGAAAATAGCTGCTGGTGCTGCAAAAGGGTTGGAATACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCTAATATACTACTTGATGACGGTTTTCATCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTTGGTCCTGTTGGTGACAAATCACATGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGTCAATTGACGGTGAAGTCTGACGTATATAGTTTTGGAGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGGCCCCATGGAGAACAGAACCTTGTCACATGGGCACGTCCATTGTTCAATGACCGCAGGAAGTTTTCAAAGTTGGCAGATCCACAGCTGCAGGGGCGGTATCCCATGCGGGGCCTTTACCAAGCTCTAGCTGTGGCGTCAATGTGCACTCAAGAACAGGCAGCAGCACGTCCTCTGATTGGGGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCACATGACAATAACAATGCTGGCCATGGTTATAGGGGAACTGGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAAAATATTAAAAAATGATGAGGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGATTCCCCACGTGAAACTGCGAGGATGTTAAACAGGGATCTTGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAAAGACGACAAAGTGTGCAGGGCAGTTTTGATGGTTCTAACGCCTAG 1413 0.4784 MGCFSCFDSKEDEKLNPNPQQETHHHHHDHDRDHNHPSHISRLPSASGGADKLRSTTSNGASKRELPVLKDGPPVQIAAQTFTFRELAAATKNFRPQSFIGEGGFGRVYKGRLETTGQVIAVKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDDGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPQLQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQAHDNNNAGHGYRGTGDDKRNRDDKGGKILKNDEGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDGSNA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03637 470 MobiDBLite consensus disorder prediction 7 39 - -
Rops6g03637 470 FunFam Serine/threonine-protein kinase PBS1 171 384 - -
Rops6g03637 470 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Rops6g03637 470 Gene3D Phosphorylase Kinase; domain 1 78 170 - -
Rops6g03637 470 PANTHER OS07G0668900 PROTEIN 3 380 - -
Rops6g03637 470 MobiDBLite consensus disorder prediction 1 69 - -
Rops6g03637 470 CDD STKc_IRAK 100 368 - -
Rops6g03637 470 MobiDBLite consensus disorder prediction 386 436 - -
Rops6g03637 470 MobiDBLite consensus disorder prediction 450 470 - -
Rops6g03637 470 SUPERFAMILY Protein kinase-like (PK-like) 76 368 IPR011009 -
Rops6g03637 470 MobiDBLite consensus disorder prediction 376 436 - -
Rops6g03637 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Rops6g03637 470 Gene3D Transferase(Phosphotransferase) domain 1 171 389 - -
Rops6g03637 470 FunFam Serine/threonine-protein kinase PBS1 68 170 - -
Rops6g03637 470 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03637 470 Pfam Protein kinase domain 97 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03637 Rops-Chr6 61481488 61486836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03637 1 458 Glycoside Hydrolase AT3G07070 56.087 4.98e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops6g03637 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03637 K13430 - gmx:100777987 812.757