LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g03636	ATGCCAAACCAAGCATGTGAATGTGCTGAGCACCTGGCAATGCCTTTGGGACGCCTGCCAATGGCATTCTTTCACCCTTGCAACCTTCCAGATGTTGAATATTTTAATGAGGAAGCTCTTTCAGACACAGAAGATTCTGATAATGAGTTCAATAGCTTGTGCCGCAGGAGTAGCCAGATGGAGTCATCAAGAAACAGTCAACAATGGGGAGGAGAAGATCTCCCACAGGTTCTGGAGGAGGTGGATCGTTTTCTCCACTGCACAACTGATAGTCCTGGGGAAGTTCCAGATTGCGTTCTCGTGTTGCCCAAATTGTTGGATTGTATGATGGATAAATACGACAGGGGCAGACACAGTCGCAGAAGCAAGTTTGGGCAGGACCCGGAAGATGACAAGTCCTTTCTAGATGCCGTGGATCGCATCTCCAAGCTCTCCGCCACTTTGAGCTTGAGTGCGTTGGATAAAACTAGCTCCGTCCTGGAAAAAGCAATGTGTCTTTTAGAGAAAGACCTCTGCGCTCTTCTGCAGAATCAATCCAAGACACCCAATAAATCATCCTCCTTCGGTTCCCTTCACCTCCTGGACTCCGATCTGAGTGTCGTTATCGAGGATGAAGATAACCCCAACGAGGATAAGGATGAGGACTTGCCAGGTTTCTCAACTGAAAAGCTTTCCATTTTGAACAAGATCGCCACCGCCATGATCACCGCGGGCTACCACACAGAGTGTTGCATGGCTTTCGCCAATTTCAGGCGAAGTGCTTTCAAGACTGCGCTGCAAAAATTTGGATACGCTGGTGTGAGAATGGAGGAGGCTTACAAAATGCAATGGGAATCGCTGGAAGGAGAAATAACTACGTGGAACAGAGTGGTTCGGCATTGCACCACCGTGCTCTTCAATGCCGAACGGAGGCTCTATGACTCCGTGTTCCCCAATCAACCCTCCATATCTCAGAACCTGTTCAGCGATCTTGCACGGGCCGTCATCTTCCATTTTCTGAATTTCGCACAAGCCGTGGTTTTGACCAAACCATCACCCGAGAAACTATTCAAATTCCTGGACATGTACGAGACCCTCAGGGATGTGGAGCCTGGCATTGTTGACGATTCCTATTCACAGAGGTGTGCAAAGGAGCTTGCATATGAGATTGCCACCGCAAAGGATAGGATGGGAGAGGCTGCCGTGGCCTTGTTCTGTGATTTGGAAAACTCAATTAAGAGTGATAATGAACGGATTCCCGTGCCAAACGGCGCAGTTCACCCACTGACTCGTTATGTCATGAATTATCTTAAATATGCATGCGAGTATAGAGATACATTGGAGCAGGTGTTTCAGCAATGTCTTACCCTCAATGAGATTGGGATTCAAAACGAAAACACAACAATGGACGTGGAAGAGGATGATGGGACGCCTAAGAATTCACCTTTTGCGGTTCAATTGATGACTATCATGGACCTTTTGGATGCAAATGCTGAAAGGAAGTCCAAGCTGTATAGGGATCCAGCTTTACGCTTTGTTTTTCTAATGAACAATGGGAGATACATTGTGCAGAAGGTCAAAGGGTGCGCGGATCTTCACGAATCCATGGGTGACAACTGGTGCAGGAGGAGGCAATCGCGTCTGAAGTTGTACCATAAGAGTTATCAGAGAGAGACTTGGAATAAGGTGCTGCAGGGCCTCAACCCGGTGGGTCTGCAGGGGAGCGGGAACAAGGTGTCCAAACAGGTTCTCAAAGAGAGGTTTAAGAGCTTCAATGCCATGTTTGAAGAGATACACAAGACGCAGAGAAGTTGGATGGTGAGCGATGAGCAGCTTCAATCGGAGCTCAGGGTTTCAATATCGGCTTTGGTGATCCCAGCCTACCGCTCCTTTCTTGGAAGATTCAAACACCATCTACAGTCAGGCACACATATTAACAAGCATGTCAAGTATCATCCCGAAGACATTGAGATTTTGATTGATGATTTGTTTGCTGGAAACGCTACCTCCATGGCCAGGAGGAGGACGGCAAGGACGTGGAGGTTAAAGGATGTACCTTCTGCTGATGCAGCAGAGAAAGAAACAGGCATGAGGGTTTCTAATCTAGAGCAACCTTCAGTCTCTGAAGCTTCTTGGCATTGTTGA	2124	0.4765	MPNQACECAEHLAMPLGRLPMAFFHPCNLPDVEYFNEEALSDTEDSDNEFNSLCRRSSQMESSRNSQQWGGEDLPQVLEEVDRFLHCTTDSPGEVPDCVLVLPKLLDCMMDKYDRGRHSRRSKFGQDPEDDKSFLDAVDRISKLSATLSLSALDKTSSVLEKAMCLLEKDLCALLQNQSKTPNKSSSFGSLHLLDSDLSVVIEDEDNPNEDKDEDLPGFSTEKLSILNKIATAMITAGYHTECCMAFANFRRSAFKTALQKFGYAGVRMEEAYKMQWESLEGEITTWNRVVRHCTTVLFNAERRLYDSVFPNQPSISQNLFSDLARAVIFHFLNFAQAVVLTKPSPEKLFKFLDMYETLRDVEPGIVDDSYSQRCAKELAYEIATAKDRMGEAAVALFCDLENSIKSDNERIPVPNGAVHPLTRYVMNYLKYACEYRDTLEQVFQQCLTLNEIGIQNENTTMDVEEDDGTPKNSPFAVQLMTIMDLLDANAERKSKLYRDPALRFVFLMNNGRYIVQKVKGCADLHESMGDNWCRRRQSRLKLYHKSYQRETWNKVLQGLNPVGLQGSGNKVSKQVLKERFKSFNAMFEEIHKTQRSWMVSDEQLQSELRVSISALVIPAYRSFLGRFKHHLQSGTHINKHVKYHPEDIEILIDDLFAGNATSMARRRTARTWRLKDVPSADAAEKETGMRVSNLEQPSVSEASWHC*	708

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g03636	707	MobiDBLite	consensus disorder prediction	692	707	-	-
	Rops6g03636	707	Pfam	Exo70 exocyst complex subunit	286	654	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Rops6g03636	707	Gene3D	Exocyst complex component Exo70	109	667	-	-
	Rops6g03636	707	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	89	659	IPR004140	GO:0000145\|GO:0006887
	Rops6g03636	707	MobiDBLite	consensus disorder prediction	678	707	-	-
	Rops6g03636	707	SUPERFAMILY	Cullin repeat-like	123	657	IPR016159	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g03636	Rops-Chr6	61450554	61458627	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops6g03636	74	668	EXO70 exocyst subunit family	AT5G13150	50.641	0.0	577

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g03636	K07195		-	gmx:100784339	769.229

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