Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03636 ATGCCAAACCAAGCATGTGAATGTGCTGAGCACCTGGCAATGCCTTTGGGACGCCTGCCAATGGCATTCTTTCACCCTTGCAACCTTCCAGATGTTGAATATTTTAATGAGGAAGCTCTTTCAGACACAGAAGATTCTGATAATGAGTTCAATAGCTTGTGCCGCAGGAGTAGCCAGATGGAGTCATCAAGAAACAGTCAACAATGGGGAGGAGAAGATCTCCCACAGGTTCTGGAGGAGGTGGATCGTTTTCTCCACTGCACAACTGATAGTCCTGGGGAAGTTCCAGATTGCGTTCTCGTGTTGCCCAAATTGTTGGATTGTATGATGGATAAATACGACAGGGGCAGACACAGTCGCAGAAGCAAGTTTGGGCAGGACCCGGAAGATGACAAGTCCTTTCTAGATGCCGTGGATCGCATCTCCAAGCTCTCCGCCACTTTGAGCTTGAGTGCGTTGGATAAAACTAGCTCCGTCCTGGAAAAAGCAATGTGTCTTTTAGAGAAAGACCTCTGCGCTCTTCTGCAGAATCAATCCAAGACACCCAATAAATCATCCTCCTTCGGTTCCCTTCACCTCCTGGACTCCGATCTGAGTGTCGTTATCGAGGATGAAGATAACCCCAACGAGGATAAGGATGAGGACTTGCCAGGTTTCTCAACTGAAAAGCTTTCCATTTTGAACAAGATCGCCACCGCCATGATCACCGCGGGCTACCACACAGAGTGTTGCATGGCTTTCGCCAATTTCAGGCGAAGTGCTTTCAAGACTGCGCTGCAAAAATTTGGATACGCTGGTGTGAGAATGGAGGAGGCTTACAAAATGCAATGGGAATCGCTGGAAGGAGAAATAACTACGTGGAACAGAGTGGTTCGGCATTGCACCACCGTGCTCTTCAATGCCGAACGGAGGCTCTATGACTCCGTGTTCCCCAATCAACCCTCCATATCTCAGAACCTGTTCAGCGATCTTGCACGGGCCGTCATCTTCCATTTTCTGAATTTCGCACAAGCCGTGGTTTTGACCAAACCATCACCCGAGAAACTATTCAAATTCCTGGACATGTACGAGACCCTCAGGGATGTGGAGCCTGGCATTGTTGACGATTCCTATTCACAGAGGTGTGCAAAGGAGCTTGCATATGAGATTGCCACCGCAAAGGATAGGATGGGAGAGGCTGCCGTGGCCTTGTTCTGTGATTTGGAAAACTCAATTAAGAGTGATAATGAACGGATTCCCGTGCCAAACGGCGCAGTTCACCCACTGACTCGTTATGTCATGAATTATCTTAAATATGCATGCGAGTATAGAGATACATTGGAGCAGGTGTTTCAGCAATGTCTTACCCTCAATGAGATTGGGATTCAAAACGAAAACACAACAATGGACGTGGAAGAGGATGATGGGACGCCTAAGAATTCACCTTTTGCGGTTCAATTGATGACTATCATGGACCTTTTGGATGCAAATGCTGAAAGGAAGTCCAAGCTGTATAGGGATCCAGCTTTACGCTTTGTTTTTCTAATGAACAATGGGAGATACATTGTGCAGAAGGTCAAAGGGTGCGCGGATCTTCACGAATCCATGGGTGACAACTGGTGCAGGAGGAGGCAATCGCGTCTGAAGTTGTACCATAAGAGTTATCAGAGAGAGACTTGGAATAAGGTGCTGCAGGGCCTCAACCCGGTGGGTCTGCAGGGGAGCGGGAACAAGGTGTCCAAACAGGTTCTCAAAGAGAGGTTTAAGAGCTTCAATGCCATGTTTGAAGAGATACACAAGACGCAGAGAAGTTGGATGGTGAGCGATGAGCAGCTTCAATCGGAGCTCAGGGTTTCAATATCGGCTTTGGTGATCCCAGCCTACCGCTCCTTTCTTGGAAGATTCAAACACCATCTACAGTCAGGCACACATATTAACAAGCATGTCAAGTATCATCCCGAAGACATTGAGATTTTGATTGATGATTTGTTTGCTGGAAACGCTACCTCCATGGCCAGGAGGAGGACGGCAAGGACGTGGAGGTTAAAGGATGTACCTTCTGCTGATGCAGCAGAGAAAGAAACAGGCATGAGGGTTTCTAATCTAGAGCAACCTTCAGTCTCTGAAGCTTCTTGGCATTGTTGA 2124 0.4765 MPNQACECAEHLAMPLGRLPMAFFHPCNLPDVEYFNEEALSDTEDSDNEFNSLCRRSSQMESSRNSQQWGGEDLPQVLEEVDRFLHCTTDSPGEVPDCVLVLPKLLDCMMDKYDRGRHSRRSKFGQDPEDDKSFLDAVDRISKLSATLSLSALDKTSSVLEKAMCLLEKDLCALLQNQSKTPNKSSSFGSLHLLDSDLSVVIEDEDNPNEDKDEDLPGFSTEKLSILNKIATAMITAGYHTECCMAFANFRRSAFKTALQKFGYAGVRMEEAYKMQWESLEGEITTWNRVVRHCTTVLFNAERRLYDSVFPNQPSISQNLFSDLARAVIFHFLNFAQAVVLTKPSPEKLFKFLDMYETLRDVEPGIVDDSYSQRCAKELAYEIATAKDRMGEAAVALFCDLENSIKSDNERIPVPNGAVHPLTRYVMNYLKYACEYRDTLEQVFQQCLTLNEIGIQNENTTMDVEEDDGTPKNSPFAVQLMTIMDLLDANAERKSKLYRDPALRFVFLMNNGRYIVQKVKGCADLHESMGDNWCRRRQSRLKLYHKSYQRETWNKVLQGLNPVGLQGSGNKVSKQVLKERFKSFNAMFEEIHKTQRSWMVSDEQLQSELRVSISALVIPAYRSFLGRFKHHLQSGTHINKHVKYHPEDIEILIDDLFAGNATSMARRRTARTWRLKDVPSADAAEKETGMRVSNLEQPSVSEASWHC* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03636 707 MobiDBLite consensus disorder prediction 692 707 - -
Rops6g03636 707 Pfam Exo70 exocyst complex subunit 286 654 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops6g03636 707 Gene3D Exocyst complex component Exo70 109 667 - -
Rops6g03636 707 PANTHER EXOCYST COMPLEX PROTEIN EXO70 89 659 IPR004140 GO:0000145|GO:0006887
Rops6g03636 707 MobiDBLite consensus disorder prediction 678 707 - -
Rops6g03636 707 SUPERFAMILY Cullin repeat-like 123 657 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03636 Rops-Chr6 61450554 61458627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03636 74 668 EXO70 exocyst subunit family AT5G13150 50.641 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03636 K07195 - gmx:100784339 769.229