Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03634 ATGGCGGCTGCATTTACATTCACAACACCAACACTGTCAAATGTTGCAGAAAGAGAAAGCAGAGGCAGAATCAGAGCATTGAACCCTAGCCTTACCCCTGCTATCGGGGTGGTTAGGTTTGGTAGGCGTGTGAATGTGAATGTGAATGGTTGTTGTCGACTAACCAGAAAGGGTTCGGGAGTCTTCCGGGTGAGGGCCAGTGGCAGTGGCAGTGGCAGTTCGGAGGAACCGGCAGCGGCGGCTCTACAGTCGAAAGTGACTCACAAAGTATACTTTGATATCAGCATTGGGAATCCAGTTGGGAAGCTTGCAGGAAGGATTGTAATTGGACTTTACGGTGACGATGTGCCCCAAACAGCTGAGAACTTCCGTGCCCTTTGTACTGGAGAGAAGGGCTTTGGCTACAAGGGCTCCACCTTCCATCGTGTCATCAAGGATTTCATGATTCAAGGAGGCGACTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATATGGTCGTACTTTCAAAGATGAGAACTTTAAATTATCTCATACTGGACCAGGAGTTCTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTGAAGACACCATGGCTGGATCAGAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTGATTGAATCACAGGAGACAGATCGGGGTGACCGACCTAGAAAGAGGGTGGTTATCAGTGACTCTGGCGAGCTTCCAATTGCTTGA 768 0.4779 MAAAFTFTTPTLSNVAERESRGRIRALNPSLTPAIGVVRFGRRVNVNVNGCCRLTRKGSGVFRVRASGSGSGSSEEPAAAALQSKVTHKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVLSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKRVVISDSGELPIA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03634 255 Gene3D - 78 255 IPR029000 -
Rops6g03634 255 SUPERFAMILY Cyclophilin-like 81 252 IPR029000 -
Rops6g03634 255 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 135 152 IPR020892 GO:0003755|GO:0006457
Rops6g03634 255 MobiDBLite consensus disorder prediction 233 255 - -
Rops6g03634 255 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 101 251 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 183 198 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 198 210 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 211 226 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 152 IPR002130 GO:0000413|GO:0003755
Rops6g03634 255 FunFam Peptidyl-prolyl cis-trans isomerase 76 255 - -
Rops6g03634 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 89 252 - -
Rops6g03634 255 CDD cyclophilin_ABH_like 88 250 - -
Rops6g03634 255 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 102 248 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03634 Rops-Chr6 61437883 61441937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03634 105 246 U-box Gene Family AT5G67530 48.252 1.49e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03634 K03768 - zju:107417611 346.665