Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03629 ATGGGATCATGTTTGTCCCTCTCGAGGTCGAGGGTTTCAACGCCTTCTCCTCCTCCTCCTTTTCTCTCTTCCCAATCACCATGCAATGCCACAACTTCAACTTCTTCCTCTTCCCCTGACTCTAATACCAAGATGCAGTTGCACAGAGTTCCCGGCAGAATCTTCTTGAATGGCTCCTCCCAGGTTGCATCCTTGTTCTGTGAGCAAGGCAAAAAAGGGATCAACCAGGATGCCATGCTTCTTTGGGAGAACTTTTATTCAATGAAGGACACCTTTTTTTGTGGTGTTTTTGATGGCCATGGACCTTATGGGCATGTGGTTGCCAAGAAAGTCAGGGATTCTCTCCCTTTAAAGCTCATTGCTCAATGGGATTTGCATCCTAATCCTAACAACAACAACAACAATGATCATAGTTATAAATCTGACTGTAACCACAATGGATTTAAGATGAATTTTGCACCACTCAGAGAATCCTTTGTGAAGGCATGTAAGGTTATGGACAAAGAACTGGAAAAGCACCATCTCGTGGATTGCTATTGCAGTGGGACAACAGCAGTCACATTGGTCAAGAAGGGGCATGACCTCCTTGTTGCAAATGTAGGGGATTCCAGAGCTGTATTGGGTACCCGAGATCAACATGATTCTCTTGTTGCTCTTCAGTTGACCACTGACCTCAAGCCAAATCTTCCAAGGGAAGCAGAGAGGATTAGGCTGTGTAAAGGAAGGGTGTTTGCCGTTCAGAATGAACCACAAGTTGCTCGAGTTTGGCTGCCTAACGTTGATTCCCCTGGCCTTGCCATGACACGAGCTTTTGGAGATTTTTGCCTCAAGGAATTTGGAGTGATCTCTGTTCCTGATGTCTCACATCACCGCCTCACTGAGAATGATGAATTTGTTGTGTTAGCCACGGATGGGGTTTGGGATGTTTTATCGAACAAAGAAGTCGTGGGCATTGTGGCATCTGCTCCACGGTCTTCTGCAGCTCGAATATTGGTTGAATCAGCTGTTCAAGCATGGAAGACCAAGCTTCCCACTTCAAAGGTTGATGATTGCTCTGTAGTTTGCCTCTTCTTTGATTCAGATTCGGACTTAAAATCAGCATACCATAGACAACCTGATACCGGAGGCATCAAATGA 1137 0.4547 MGSCLSLSRSRVSTPSPPPPFLSSQSPCNATTSTSSSSPDSNTKMQLHRVPGRIFLNGSSQVASLFCEQGKKGINQDAMLLWENFYSMKDTFFCGVFDGHGPYGHVVAKKVRDSLPLKLIAQWDLHPNPNNNNNNDHSYKSDCNHNGFKMNFAPLRESFVKACKVMDKELEKHHLVDCYCSGTTAVTLVKKGHDLLVANVGDSRAVLGTRDQHDSLVALQLTTDLKPNLPREAERIRLCKGRVFAVQNEPQVARVWLPNVDSPGLAMTRAFGDFCLKEFGVISVPDVSHHRLTENDEFVVLATDGVWDVLSNKEVVGIVASAPRSSAARILVESAVQAWKTKLPTSKVDDCSVVCLFFDSDSDLKSAYHRQPDTGGIK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03629 378 Gene3D - 57 360 IPR036457 -
Rops6g03629 378 ProSiteProfiles PPM-type phosphatase domain profile. 62 358 IPR001932 -
Rops6g03629 378 MobiDBLite consensus disorder prediction 25 45 - -
Rops6g03629 378 MobiDBLite consensus disorder prediction 1 45 - -
Rops6g03629 378 Pfam Protein phosphatase 2C 137 324 IPR001932 -
Rops6g03629 378 CDD PP2Cc 61 358 IPR001932 -
Rops6g03629 378 SUPERFAMILY PP2C-like 57 359 IPR036457 -
Rops6g03629 378 SMART PP2C_4 53 356 IPR001932 -
Rops6g03629 378 PANTHER PROTEIN PHOSPHATASE 41 356 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03629 Rops-Chr6 61362785 61364787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03629 46 362 PP2C-type Phosphatase Gene Family AT1G16220 57.357 1.03e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03629 - - gmx:100802479 478.018