Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03609 ATGTCGCGCCAACAAGACGAAGAACAACTCCGAGCTGTGAAGAGGGAACGGCTTAATGAAAGCGCCGACCAGCAGCAAGACTCCGCCACTCGCAGGGTCATACGCTCCCAATTTCTCAAACTCAAGAATCTCATTAATGAGAAAAGGGATGATTTGATTAACACAGATTCCGACAAGTTCGACACCATCTTGAGCGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCGAGAGAACAGGTTGCAGACGCTGAGGCATTGCTTGATCTCACGCGCACTTTGGTGGGATCCGTTAAGTCTCTGGTGAACGACGGTATTACCCCTACTGAATTCGTTGCGTCTTTGCTCAAACACTATGGGCAGCCACCCCAGGAGAATTCTATCAACTGGCAAAAACTTGGCCTTGACGTATCCCCCATTTTTCTCATGGTTCATGGCTCAAACACCATGCTTGGTCCCATGGAAAATCAGTTGAAGCAAAAGAAGGTTGGAGCTCCCCGAAAACGAGCTTCTCGCCCTACAACAACTGCTAGGCCGGAACAGGTCAATGAGACTGTGGGAGAGGAAAAGACTGATACCGACAAAAATATGGCAATCATGTTTGACATTTTGAGGAGAAAGAAACGTGTCCCACTCGAAAACCTGGTTATGAACAGAGTTTCTTTTGCTCAAACGGTGGAAAACTTGTTTTCCCTATCATTCTTGGTGAAAGATGGTCGTGTTGAGATCAGTTTGGATGAAAACCATTCACACTATGTTTCACCTAAAAATGCTCCAGCAGCCAACTCAATAATGTCAAAAGAGGTTTCTTACACTCATTTTGTGTTCAGACTTGATTACCAAGATTGGAAGTTAATGAAGGATATTGTGCCTGATGGGGAGGAGCTAATGCCACATAGGATTCAATGTAGCACTATGGTGGACTCTCAGGCAGAGATTGGTGGTGACAATTCCCAACCAGCTTTGGCAGTAACACCTATCAGGAAGCTATCACGGAATCGAGGGCTGATTGTGCAGGAGGAAAGTGTCGTAGAAGAATCTCCAGATTGTGATGAGGAAAATCCTTCGAGAGGGGTTGCAATTCGGAGGTGTAAGCGTAAGCTTCATTAA 1110 0.4586 MSRQQDEEQLRAVKRERLNESADQQQDSATRRVIRSQFLKLKNLINEKRDDLINTDSDKFDTILSEFDKLHDQVEKPREQVADAEALLDLTRTLVGSVKSLVNDGITPTEFVASLLKHYGQPPQENSINWQKLGLDVSPIFLMVHGSNTMLGPMENQLKQKKVGAPRKRASRPTTTARPEQVNETVGEEKTDTDKNMAIMFDILRRKKRVPLENLVMNRVSFAQTVENLFSLSFLVKDGRVEISLDENHSHYVSPKNAPAANSIMSKEVSYTHFVFRLDYQDWKLMKDIVPDGEELMPHRIQCSTMVDSQAEIGGDNSQPALAVTPIRKLSRNRGLIVQEESVVEESPDCDEENPSRGVAIRRCKRKLH* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03609 369 Pfam Nse4 C-terminal 210 294 IPR014854 -
Rops6g03609 369 PANTHER UNCHARACTERIZED 14 353 IPR027786 GO:0005634|GO:0006281|GO:0030915
Rops6g03609 369 MobiDBLite consensus disorder prediction 159 189 - -
Rops6g03609 369 MobiDBLite consensus disorder prediction 1 22 - -
Rops6g03609 369 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03609 Rops-Chr6 61068633 61070956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03609 8 368 Non-SMC Element family AT1G51130 51.169 2.63e-123 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03609 K22825 - gmx:100792117 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03609 6 61068633 61070956 Rops6g03609 6 61068633 61070956 ECH