Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03608 ATGGAATACGGGGTTGTGGGTTTGGTCTTAGCCATATTGGTGTGGTGGGTAATGGTGATGGAACGTAGGTCTCATAGAGAAGATAAACAAGGTCAGCTTCCACCTGGACCAAGATGTTGGCCAGTGGTTGGCAACATATTCCAACTAGGTTGGTCACCACACGAGTCCTTTGCAAAACTGGCTCGTAAACATGGTCCCATCATGACCATTTGGCTAGGTTCCATGTGCACAGTGGTAATTTCCTCCAACGAAGTGGCTCGTGAGATGTTCAAAAACAACGACGTGGTTCTTGCTGGAAGGAAGATTTATGAGGCCATGAAAGGGGACCATGGAAGTGAAGGCTCTCTCATAACTTCTCAATACAACACACACTGGCGTATGTTGAGGCGCTTGTGCACCACTGAGTTCTTTGTCACAAGTCGCTTAGATGCCATGCGAGGTGTGCGTGCAAAATGCATACACCGCATGCTTCACTTGATGGAAGAAGCTGGTGAATCTGGCACTCGTGCTGTTGATGTTGGGGGGTTCTTTTTCTTGATGGCTTTTAACCTTATAGGGAACCTCATATTTTCAAAGGATTTGTTAGACCCTGGAATGGAGAGAGGGGCTAGATTTTATGAGCATGCAGTTAAGGTTATGGAGTATGCTGGGAGGCCCAACGTGGCAGATTTCTTCCCTGTTTTGAAATGGTTTGACCCTCAAGGGATAAGGAGGAAGACACAGTTCCATGTTGAGCGAGCATTTGAGATAGCAGGATGGTTCATCCAACAAAGGATGGAAGATGGTTGCAGTGGAAGGGAGAGCAAAGACTTCTTGGATGTCCTCCTGGAGTTTCGTGGAGATGTTAGCGGGCCCTATACTTTTTCTGCAAGAACTATTAACGTCCTTGTCTTTGAGATGTTCACTGCAGGGACAGACACGACAACAAGCACGATAGAATGGGCGATGGCAGAGCTTCTGCACAACCCAAGAACGCTAAAGAAACTGCAGACGGAGCTAAGGAGCAAAATAGGTCCAGATACGAATATTGAAGAAAAGGACATTGAGAATCTTCCTTACCTCAAAGCAGTAATAAAGGAAACACTGAGACTTCACCCACCTCTTCCTTTTCTGGTTCCTCACATGGCCATCGACTCTTGCAAGATGCTAAACTACAATATTCCCAAAGAGTCACAAATCTTAGTGAATGTTTGGGCAATTGGGAGGGACCACAAAGTGTGGGATGCTCCCTTACTGTTCTGGCCAGAGAGGTTTTTGGAGCCAAACATGGTGGATTACAAGGGACACCACTTTGAGTTTATACCCTTTGGTTCGGGAAGAAGAATGTGCCCTGCTATGCCACTTGCCTCTCGCGTGCTTCCCCTGGCATTAGCCTCCCTCTTGCACTCGTTTGATTGGGTTTTGCCAGATGGCCTTAAACCAGAGAACATGGACATGAAAGAGGGAATGGGAATAACACTAAGAAAAGCTGTTCCTTTGAAAGCCATACCAGTGCCTTACAAAGGAACTCTGGTTTCAGATGAATAA 1527 0.4643 MEYGVVGLVLAILVWWVMVMERRSHREDKQGQLPPGPRCWPVVGNIFQLGWSPHESFAKLARKHGPIMTIWLGSMCTVVISSNEVAREMFKNNDVVLAGRKIYEAMKGDHGSEGSLITSQYNTHWRMLRRLCTTEFFVTSRLDAMRGVRAKCIHRMLHLMEEAGESGTRAVDVGGFFFLMAFNLIGNLIFSKDLLDPGMERGARFYEHAVKVMEYAGRPNVADFFPVLKWFDPQGIRRKTQFHVERAFEIAGWFIQQRMEDGCSGRESKDFLDVLLEFRGDVSGPYTFSARTINVLVFEMFTAGTDTTTSTIEWAMAELLHNPRTLKKLQTELRSKIGPDTNIEEKDIENLPYLKAVIKETLRLHPPLPFLVPHMAIDSCKMLNYNIPKESQILVNVWAIGRDHKVWDAPLLFWPERFLEPNMVDYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALASLLHSFDWVLPDGLKPENMDMKEGMGITLRKAVPLKAIPVPYKGTLVSDE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03608 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 FunFam Cytochrome P450 76C4 25 496 - -
Rops6g03608 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops6g03608 508 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 499 - -
Rops6g03608 508 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 CDD CYP76-like 61 497 - -
Rops6g03608 508 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03608 508 Gene3D Cytochrome P450 26 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03608 Rops-Chr6 61064695 61067716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03608 5 503 Cytochrome P450 AT3G52970 61.714 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03608 - - gmx:100778988 843.188