Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03599 ATGAGTCTTACTATCCTTACTCTTATCCTTCTCCCCTTGCTGCCCTGCATCTATGCACAGAATGTTAGTGTTGGTAAGACACTTGTTGCAGGTGACGGGGGTGCTCCATGGCTTTCTCCAGCAGGAGAGCTTGCCTTGGGATTTTATCAACTTGAGGGTGACCAATTCTTGCTAGCTATATGGTATCCCAAAATACCTGACAAGACTGTCATATGGTCCGCAAATGGAGACAACCCTGCTCCTGAAGGATCAAAACTAGAGCTAAATGAATACAATGGACTAGTGCTGAGTAGCCCTCAAGATGGTGAGCAATGGAGATCACAACCCATATCAGGTACTGTTTCTTATGGGTTAATGAATGATACAGGCAACTTCCAGCTGCTGGATGAGAATTCTCAGGTGTTGTGGGAAAGTTTCAGCTTTCCAACTGATACGTTGGTACCAACTCAAATTATGGAGGTCAACGGCACACTCTCATCTCGACAGAAAGAGACCAACTTCTCAACGGGAAGGTTTCAATTTCGTTTGCTTGAGGATGGTAATGCTGTGCTCAATCCCATAGACTTGCCCGCCTACTACACTTATGACCCTTACTACCTCAGTAAAACCAGTGATGCTACCAATCATACAAACTCTGGTTACCAGGTGGTTTTTGATGAATCAGGGTTGTCCATAATGAAAAGGAGTGGTGAGAGGGTTGGTATTACAGGTCCAGACGATGTGCGCTCAACTGATTCCTATCATTACAGAGCAACCATCAATTTTGATGGAGTTTTCACTATATCACGTTACCCGAAAAGACCAAATGCAAATCAAAGCTGGACAGTGGTGAAGACATTACCAGGAAACATCTGCCTGGATTTAACAATGGTAAAGGGCAGTGGGGTATGTGGATTCAACAGTATCTGCACTCTCAAGCCTGACGGAAGACCAATCTGCAGATGCACAGAAGGGTATTCTCTTGTTGATTCAACTGATGAGTATGGCAGCTGCAAACCAAATTTCAACCTCGGTTGTGAAGGAAGTGGACAGAACTCGCAAGAAGATCTATACTTCATGAAGGAAACTCAAAATACTGACTGGCCTATTTCAGATTATGAATTGGCTCGACGTCAAACTTTAGAAGAGTGCAAGGCTTCTTGCTTGCGAGATTGCTCATGCGCTGTTGCTGTTGCTAGAGGTGATAGGTGCTGGAAGAAGAAGCTGCCTCTCTCAAATGGAAGAGAGGATACAGCACTTGTGAGATTTGGTTTCATTAAATTGAACAAAAGTAGTGATTCATCGGGAAGTCCTCCATCTCCATTCATAGAAGAGAAGAAATATATAAAAGATCAAGATACTTTGATTACTGTGATATCAGTCCTTCTAGGCGGCTCTGTCTTTGTCATTTTCATGCTGCTCAGTGCAATATGTATTGGTTTCTTCTTCTACTACAACAATAGAATTTCTACCAATAAAATTGTTGCAGAGAGCAACTTGCGCAGTTTCACCTTTGGAGAGCTTGTGCAAGCAACAGACAACTTCAAAGAAGAACTGGGAAGGGGATCTTGTGGGATTGTATTTAAAGGAATTTCAAATTTGACAACTATTGCAGTCAAGAAATTAGACAAGGTGTTCAAAGACAGTGACAAGGAATTTAAAACAGAAGTGAACGTGATAGGCCAAACTCATCACAGGAACTTGGTGCGCCTGCTAGGATATTGTGACGAGGGAGAACACAGGATTCTGGTATATGAGTTCTTGAGCAATGGAACTTTGGCAAGCTTCCTTTTTGGAGATTTCAAACCAAGTTGGAATCAAAGAGTGCATATTGCCTTTGGGATTGCAAGAGGGCTCGTTTACTTGCACGAGGAATGCTGCACCCAGATCATCCATTGTGACATAAAGCCACAGAATATACTTCTAGATGAGTATTACAATGCAAGGATATCAGATTTTGGGTTGGCAAAGCTACTTATGATCAATCAAAGCCACACAGAAACTGGCATTCGAGGAACAAAAGGGTATGTTGCGCCAGAGTGGTTCAGGAGTGCACCAATAACTGTCAAGGTTGATGTTTACAGTTTTGGTGTGCTGCTTCTGGAGATCATTTGCTGTAGAAGAAATGTGGATACCAACATTGGCAATGAAGAAATGGTCATTTTAACTGATTGGGCTTATGACTGCTATCGAGCTGGAAGATTTGACAACCTGGTTGTTGATGATGAAGAGGCTATCAACGACATGAAGAGGCTGGAAAGGTTTGTTATGGTAGCTGTTTGGTGCCTTCAAGAAGATCCGTCTCTCAGGCCAACAATGAAGAAGGTTATGTTGATGCTGGAAGGAATTGCTCCAGTCACCATTCCACCGAGTCCCTGCCTTTATACTTCTGTTTCTGTTAGTTGCAGTTAA 2391 0.4279 MSLTILTLILLPLLPCIYAQNVSVGKTLVAGDGGAPWLSPAGELALGFYQLEGDQFLLAIWYPKIPDKTVIWSANGDNPAPEGSKLELNEYNGLVLSSPQDGEQWRSQPISGTVSYGLMNDTGNFQLLDENSQVLWESFSFPTDTLVPTQIMEVNGTLSSRQKETNFSTGRFQFRLLEDGNAVLNPIDLPAYYTYDPYYLSKTSDATNHTNSGYQVVFDESGLSIMKRSGERVGITGPDDVRSTDSYHYRATINFDGVFTISRYPKRPNANQSWTVVKTLPGNICLDLTMVKGSGVCGFNSICTLKPDGRPICRCTEGYSLVDSTDEYGSCKPNFNLGCEGSGQNSQEDLYFMKETQNTDWPISDYELARRQTLEECKASCLRDCSCAVAVARGDRCWKKKLPLSNGREDTALVRFGFIKLNKSSDSSGSPPSPFIEEKKYIKDQDTLITVISVLLGGSVFVIFMLLSAICIGFFFYYNNRISTNKIVAESNLRSFTFGELVQATDNFKEELGRGSCGIVFKGISNLTTIAVKKLDKVFKDSDKEFKTEVNVIGQTHHRNLVRLLGYCDEGEHRILVYEFLSNGTLASFLFGDFKPSWNQRVHIAFGIARGLVYLHEECCTQIIHCDIKPQNILLDEYYNARISDFGLAKLLMINQSHTETGIRGTKGYVAPEWFRSAPITVKVDVYSFGVLLLEIICCRRNVDTNIGNEEMVILTDWAYDCYRAGRFDNLVVDDEEAINDMKRLERFVMVAVWCLQEDPSLRPTMKKVMLMLEGIAPVTIPPSPCLYTSVSVSCS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03599 796 Gene3D Transferase(Phosphotransferase) domain 1 581 780 - -
Rops6g03599 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 197 IPR036426 -
Rops6g03599 796 FunFam S-receptor-like serine/threonine-protein kinase 478 580 - -
Rops6g03599 796 SUPERFAMILY Protein kinase-like (PK-like) 490 774 IPR011009 -
Rops6g03599 796 SMART serkin_6 506 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03599 796 ProSiteProfiles Protein kinase domain profile. 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03599 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 17 140 - -
Rops6g03599 796 CDD B_lectin 22 142 IPR001480 -
Rops6g03599 796 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 786 - -
Rops6g03599 796 ProSiteProfiles Bulb-type lectin domain profile. 13 140 IPR001480 -
Rops6g03599 796 Pfam PAN-like domain 355 400 IPR003609 -
Rops6g03599 796 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 780 - -
Rops6g03599 796 Pfam D-mannose binding lectin 69 157 IPR001480 -
Rops6g03599 796 Gene3D - 142 285 - -
Rops6g03599 796 CDD STKc_IRAK 512 776 - -
Rops6g03599 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Rops6g03599 796 Gene3D - 17 141 IPR036426 -
Rops6g03599 796 SMART blect_4 19 142 IPR001480 -
Rops6g03599 796 Gene3D Phosphorylase Kinase; domain 1 476 580 - -
Rops6g03599 796 PIRSF SRK 1 795 IPR024171 GO:0004674
Rops6g03599 796 Pfam Protein kinase domain 509 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03599 796 FunFam Serine/threonine-protein kinase 143 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03599 Rops-Chr6 60959801 60962318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03599 474 775 Receptor kinase-like Gene Family AT1G60800 42.581 1.96e-69 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops6g03599 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03599 - - gmx:100811299 1221.45