Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03586 ATGAGTAACAGTTGGCCATTGATACCTTCTCCCTCATCATCACCACCGCCACCTCCTTCCTTCCTTCCTTCCTTCCTTCCCTACAAATGGCATGTCGTGTTAAAAGGCAAAGCCAATTTCTCATCTCATCTCATAGCTCAAACTTCACCATTTCCTTTCCTTTGCATAATAAACCAAAAACCAAACCCTAGCAATAGCAACAGAGACTTTCACCGTCGTCCTGGTCAGTTGGCACATGCTTCTTCTCCTGATTACTTTGTCCGCCTGGGGAATACGAATTGCAAAGACGATTTATATTTGAGGAAGAGAACAAGGATGCGTCGGTGGCTTTGTTGCACTTGTCAGGTGGAAGAGGCTTACCCATCAAATGAAAATGAACACCTGAAAAGCCCAAGGAATTATGGAGATGGCAACTCAAAAGGCTCAAAGGCGTCAGCTCCTGTCAAGCCTGAAACTCAAAAGACACCTCCACCTATCGAAGTTCCTGCATTATCCTTAGACGAGCTGAAGGAAAAGACTGACAACTTTGGATCGAAGGCATTGATTGGCGAAGGATCATATGGAAGAGTGTATTATGCAACCTTAAATGATGGAAAAGCTGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCCGAATCAAATAATGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGAAAATTTTGTGGAGTTGCATGGTTACTGTGTTGAAGGAAGTCTTCGTGTTCTTGCATATGAGTTTGCTACTATGGGATCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAGGGGGCACAACCAGGTCCAACTCTTGATTGGATACAGCGAGTTAGGATTGCAGTTGATGCAGCAAGGGGATTAGAATATTTACATGAGAAGGTTCAATCACCGATTATTCACAGAGATATCAGATCAAGTAATGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTTAACCTTTCTAATCAAGCCCCTGACATGGCCGCACGCCTTCATTCTACTCGAGTATTGGGAACTTTTGGGTATCATGCTCCAGAATATGCCATGACTGGCCAGTTGACTCAAAAGAGTGATGTCTACAGCTTTGGCGTTGTTCTTCTTGAGCTTCTTACAGGAAGGAAACCTGTTGATCATACCATGCCTCGAGGACAGCAAAGTCTTGTCACATGGGCTACCCCAAGATTAAGTGAAGATAAAGTGAAACAATGTGTGGACCCAAAACTGAAGGGAGAGTATCCCCCGAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGTCTCCCGCTCCCGCTCCTGCACCAGAAAGTTGA 1410 0.439 MSNSWPLIPSPSSSPPPPPSFLPSFLPYKWHVVLKGKANFSSHLIAQTSPFPFLCIINQKPNPSNSNRDFHRRPGQLAHASSPDYFVRLGNTNCKDDLYLRKRTRMRRWLCCTCQVEEAYPSNENEHLKSPRNYGDGNSKGSKASAPVKPETQKTPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNDGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNENFVELHGYCVEGSLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQSPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPAPAPES* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03586 469 ProSiteProfiles Protein kinase domain profile. 176 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03586 469 Gene3D Phosphorylase Kinase; domain 1 148 252 - -
Rops6g03586 469 SMART tyrkin_6 176 454 IPR020635 GO:0004713|GO:0006468
Rops6g03586 469 ProSitePatterns Tyrosine protein kinases specific active-site signature. 304 316 IPR008266 GO:0004672|GO:0006468
Rops6g03586 469 SUPERFAMILY Protein kinase-like (PK-like) 154 454 IPR011009 -
Rops6g03586 469 MobiDBLite consensus disorder prediction 123 160 - -
Rops6g03586 469 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Rops6g03586 469 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 109 462 - -
Rops6g03586 469 FunFam PTI1-like tyrosine-protein kinase 3 254 464 - -
Rops6g03586 469 Gene3D Transferase(Phosphotransferase) domain 1 254 463 - -
Rops6g03586 469 FunFam PTI1-like tyrosine-protein kinase 3 138 252 - -
Rops6g03586 469 MobiDBLite consensus disorder prediction 135 149 - -
Rops6g03586 469 Pfam Protein tyrosine and serine/threonine kinase 181 454 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03586 Rops-Chr6 60869126 60873834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03586 110 455 Receptor kinase-like Gene Family AT4G02010 46.705 5.82e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Rops6g03586 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03586 K13436 - mnt:21407434 694.501