Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03575 ATGAGCTCAGCTGCATCAATGAATATAGGAATGGCTATACCCAACAATCGTGTATTCTCACTCTCAGCACTGAATGCAAGGCCAGAGCTTTTGGTGACTTCTCTCCCGTTCAATTGCAGTGTCCCTGAAAACAATGCCATCAAATTCTCAAGCATCCATTTCCATCTGGGCTATTCACTTAATAAACTTCAGCTTCGGCCATTGAACACCACAAGAAATTTGTGTGGGGTGTCCGTGCCAAGAGCTATAGCAACTGGGGTGCAAGAAGTTCTTCCACCATCCCTTACTTCCACTTCACCCCCACCTTCCTTGTTTGATGGAACGACGAGGTTGTATATCTCCTACAAATGCCCGTATGCCCAGCGTGTATGGATCACCCGTAACTGTAAGGGATTACAGGATAAGATACAATTGGTTCCTATTGATCTACAAGATAGGCCTTCCTGGTATAAGGAGAAAGTCTACCCACCCAACAAGGTTCCATCTTTGGAACACAATAATGAAGTTAGAGGAGAGAGTCTCGATCTGATTAAATATATTGACAGTCACTTTGAAGGGCCCTCCCTTTTCCCTAGTGGTCCTGATAAGGAGTTTGCTGAAGAGTTGCTATCTTACACTGATACCTTTTACAAGACCGTTGTTTCTTCATTTAAAGGAGATGTGACTGAAGCCGGCACTGTATTTGATTACCTCGAAACTTCTCTCTCCAAATATGACGATGGACCTTTCTTCCTTGGCCAATTCAGTCTAGTGGATATAGCATATGCTCCTTTCATTGAAAGATTTCGACCATTTTTAATGGATGTGAAAAATTATGACATTTCAATGGGCAGGCCTAAACTGGCAGCGTGGATTGAGGGAATGAACAACGTTGATGGCTACAAAGTCACCCGTTCTGATCCTAAGGAGCTTGTTGAAAGCTACAAGAAGCGCTTCCTGGCCAATCCATGA 951 0.4364 MSSAASMNIGMAIPNNRVFSLSALNARPELLVTSLPFNCSVPENNAIKFSSIHFHLGYSLNKLQLRPLNTTRNLCGVSVPRAIATGVQEVLPPSLTSTSPPPSLFDGTTRLYISYKCPYAQRVWITRNCKGLQDKIQLVPIDLQDRPSWYKEKVYPPNKVPSLEHNNEVRGESLDLIKYIDSHFEGPSLFPSGPDKEFAEELLSYTDTFYKTVVSSFKGDVTEAGTVFDYLETSLSKYDDGPFFLGQFSLVDIAYAPFIERFRPFLMDVKNYDISMGRPKLAAWIEGMNNVDGYKVTRSDPKELVESYKKRFLANP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03575 316 Pfam Glutathione S-transferase, C-terminal domain 221 286 - -
Rops6g03575 316 FunFam Glutathione S-transferase L2, chloroplastic 82 185 - -
Rops6g03575 316 Gene3D - 186 315 - -
Rops6g03575 316 FunFam Lambda class glutathione S-transferase 186 315 - -
Rops6g03575 316 SUPERFAMILY GST C-terminal domain-like 184 312 IPR036282 -
Rops6g03575 316 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 107 188 IPR004045 -
Rops6g03575 316 Pfam Glutathione S-transferase, N-terminal domain 111 187 IPR004045 -
Rops6g03575 316 SUPERFAMILY Thioredoxin-like 101 189 IPR036249 -
Rops6g03575 316 Gene3D Glutaredoxin 83 185 - -
Rops6g03575 316 CDD GST_C_Lambda 196 309 - -
Rops6g03575 316 PANTHER GLUTATHIONE S-TRANSFERASE L1 86 312 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03575 Rops-Chr6 60650154 60652900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03575 65 314 Glutathione S-transferase Gene Family AT3G55040 61.111 2.26e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03575 K00799 - aew:130775349 375.941