LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g03574	ATGGCTGCCAAGTTTGCAAATGGTCTCACAGTACTTGTTATCCTGGCCTCAATGTTTAAAGTGAGAATTGAAGAGATCCCATTTGATTATGAGAAAGAAGACAATGAAGATGAATATGGTGAAAAGGAGGATGTGGATGAATATGTTGAAGAGAAGGAGGTTGTGGAGGAATATGTTGCAGAGGAAAATGATGAAGGTGTTGATGAGGATGGATTGAGCTATAAGGATGGTCCAATTGATGGTGAAGGGACGATGATAAATGTTGATAATGTTGACAATATTGGTAATTTGGACCTAGCTAACTTAGGTGCACATCAAATAGTGAATATTGATTTCGGTAGTCTTGAGGTGGCGTTGTTATTGTACCGTTTATATGCAAGAGTGAAAGGATTTGCTGTTAGGAAATCAAAGGTACACAGGAGTAAAAATGGTGAGATTGTCCAACAAGTATTTGTTTGCAATAGACAGGGATTCAGGGAGGATAAAGAATTGAGTGGTAAACAGCATCAGAGGAAGGCAAGATTGCAAACTAGATGTGGGTGTGAAGCTCAATATAAGGTTCATATAGATAAAGAATCTATACGATGGCATGTTACTTATTTCAATGATGAACACAATCATCAAATGTTGGATGCGAAGGAGAATAGAATTTCCATTGGGGACGACAGATGCAAGCTTAAATTGTTAGATCCAGATGATGGATGTGCATCTAGTAGTGTGGGACCCAATTTAAGGGATCCATCCCAGGCAACCAGTAGAGGAAAAAGTTGTTTGGCATCATCATCCTCTGGTATTAAAACTAGGAGGAAGATAAAATGTTCATTTTGCAAACTACAAGGGCATAACAATAAATTGTGCAAGGCTTTTAGGAATTATTCTGGGACGATGAAAATTCAATCTGGAACACAAATGCCATGGGATGAAAAGGAGATAACATTTAACAATGAAGACTATTATGTTCAGATTTTACATCATGCAGAGTTGGGTTAG	990	0.3788	MAAKFANGLTVLVILASMFKVRIEEIPFDYEKEDNEDEYGEKEDVDEYVEEKEVVEEYVAEENDEGVDEDGLSYKDGPIDGEGTMINVDNVDNIGNLDLANLGAHQIVNIDFGSLEVALLLYRLYARVKGFAVRKSKVHRSKNGEIVQQVFVCNRQGFREDKELSGKQHQRKARLQTRCGCEAQYKVHIDKESIRWHVTYFNDEHNHQMLDAKENRISIGDDRCKLKLLDPDDGCASSSVGPNLRDPSQATSRGKSCLASSSSGIKTRRKIKCSFCKLQGHNNKLCKAFRNYSGTMKIQSGTQMPWDEKEITFNNEDYYVQILHHAELG*	330

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g03574	329	MobiDBLite	consensus disorder prediction	237	260	-	-
	Rops6g03574	329	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	34	263	-	-
	Rops6g03574	329	MobiDBLite	consensus disorder prediction	241	260	-	-
	Rops6g03574	329	Pfam	FAR1 DNA-binding domain	121	210	IPR004330	-
	Rops6g03574	329	Coils	Coil	45	65	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g03574	Rops-Chr6	60644927	60648444	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops6g03574		FAR1	2.1e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g03574	-		-	tpra:123913749	142.51