Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03572 ATGGTATCAGCTACAATTAGGCGAATTGTGTCACATTGTTGGAGACCATCTGGTGAGGGTGAAAATTCTAGTAGGCATGGGGATGCAAGTGGACGTGTTGATGGTTTGTTATGGTATAAAGATTCAGGAAGACATGCCAATGGTGAATTCTCAATGGCAGTTGCTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGTATCTGGCCCCTTGAACTCACTTGCAGAAAGTTCTCATGGAACTTTTGTTGGTATATATGATGGGCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAACGATCGCTTATTTAATAATATCAAGAAATTCACTTCAGAAAATCAGGGAATGTCAGCTGATGTTATCAGTAGAGCATTCTTGGCAACAGAAGAAGAATTTCTTTCTCTGGTAAAGAAGCAGTGGCTGCACAAGCCGCAGATAGCATCGGTTGGATCTTGCTGTTTGGTAGGTATGATATATAGTGGGGAGCTCTATATTGCAAATGCAGGAGACTCTCGAGCTGTGTTAGGTAGATTGGATGAGGCTACAAAAGAGGTTACAGCAATTCAACTATCCACTGAGCACAATGCTAGCCAGGAATCTGTGAGAGAGGAGTTGCGTTCATTGCATCCTGGTGATCCGCAGATTGTAATGATGAAGCACAAGGTCTGGCGTGTGAAGGGTCTTATTCAGGTTTCAAGATCCATCGGAGATGCCTATCTAAAGAGGGCAGAGTTTAACAAAGCACCACTGTTGCCAAAATTTAGATTCTCAGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAGCAATACTATCACATAAACTCCATCCTCAAGATCAATTTCTTATATTTGCATCAGACGGGTTATGGGAGCACGTGAGCAATCAAGAAGCAGTTGACATTGTCCAGAGCTATCCACGTAATGGAGTAGCAAAGAAACTTATCAAAACTGCACTTTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAAATTGATCGTGGGGTGAGGAGACATTTCCATGATGACATCAGTGTTATAGTTTTGTATCTTGACTCACATCTAACTAGCCGTTGTATTTCACGTGGGCCCATCGTTTCTATCAAAGGAGGTGGTGATTTTGGTTTTAATATTGGTATTCTAAATGCCTAG 1170 0.4197 MVSATIRRIVSHCWRPSGEGENSSRHGDASGRVDGLLWYKDSGRHANGEFSMAVAQANNLLEDQSQLVSGPLNSLAESSHGTFVGIYDGHGGPEASRFVNDRLFNNIKKFTSENQGMSADVISRAFLATEEEFLSLVKKQWLHKPQIASVGSCCLVGMIYSGELYIANAGDSRAVLGRLDEATKEVTAIQLSTEHNASQESVREELRSLHPGDPQIVMMKHKVWRVKGLIQVSRSIGDAYLKRAEFNKAPLLPKFRFSEPFEQPILKAEPAILSHKLHPQDQFLIFASDGLWEHVSNQEAVDIVQSYPRNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVLYLDSHLTSRCISRGPIVSIKGGGDFGFNIGILNA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03572 389 CDD PP2Cc 50 357 IPR001932 -
Rops6g03572 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Rops6g03572 389 ProSiteProfiles PPM-type phosphatase domain profile. 46 357 IPR001932 -
Rops6g03572 389 SMART PP2C_4 43 355 IPR001932 -
Rops6g03572 389 Gene3D - 38 365 IPR036457 -
Rops6g03572 389 SUPERFAMILY PP2C-like 73 358 IPR036457 -
Rops6g03572 389 PANTHER PROTEIN PHOSPHATASE 34 355 IPR015655 GO:0004722|GO:0006470
Rops6g03572 389 FunFam Phosphatase 2C family protein 38 367 - -
Rops6g03572 389 Pfam Protein phosphatase 2C 69 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03572 Rops-Chr6 60626578 60630823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03572 3 381 PP2C-type Phosphatase Gene Family AT3G12620 74.474 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03572 K01102 - gmx:100807559 644.81