Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03532 ATGATCTCAAACACAGAGCCCTCAGAACATGCCGCGGCGGCCACCACCGCCTCCGACGCCGCCGCGAAAGCCACCATATCTTCCGATGAAGATCAGCCCGCGCCGCCGGCAACGCCAAACATTGTGATGTCCTCCAGGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCCAAATATCAGAGGTTGATGGCCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGTCACGGAGGTTCACGGACTGCAGAATACCTAAAAAATAATCTGTTCAAGAATTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTGTGTTGTTGGGAGACCGAATTCTCGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCATTGTCTATTGATCACAAGCCTGATAGATCTGATGAGCGTCAAAGAATTGAACAGGCTGGGGGATTCATAATTTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCCTATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATAATAATCGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAGAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATTAAAGAAGCTTATGCACGAGGAAGCTCAGACAACATCACTTGTGTCGTTGTTCGATTTGATCTATCCTGA 954 0.457 MISNTEPSEHAAAATTASDAAAKATISSDEDQPAPPATPNIVMSSRDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETQISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAVLLGDRILVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03532 317 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
Rops6g03532 317 SMART PP2C_4 58 312 IPR001932 -
Rops6g03532 317 SUPERFAMILY PP2C-like 62 315 IPR036457 -
Rops6g03532 317 ProSiteProfiles PPM-type phosphatase domain profile. 69 314 IPR001932 -
Rops6g03532 317 Gene3D - 62 316 IPR036457 -
Rops6g03532 317 CDD PP2Cc 68 314 IPR001932 -
Rops6g03532 317 MobiDBLite consensus disorder prediction 1 45 - -
Rops6g03532 317 FunFam probable protein phosphatase 2C 59 61 317 - -
Rops6g03532 317 PANTHER PROTEIN PHOSPHATASE 40 314 IPR015655 GO:0004722|GO:0006470
Rops6g03532 317 Pfam Protein phosphatase 2C 70 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03532 Rops-Chr6 60204377 60213262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03532 41 317 PP2C-type Phosphatase Gene Family AT1G43900 74.729 5.17e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03532 K17506 - gmx:100776867 551.206