Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03527 ATGGCAGGGGATTATGCTGCTGACCTGAAGAGTGTCTCAGCAATTGCCTTGTCGGATTTAAAGTCAATAGCTGACTGTATGATCAGCTCTGGCTATGGTAAAGAGTGTTGCATGATATATAAGTCAATAAGAAAGTCCATAATTGATAAAAGACTTAATAATCTTGGAATAGAACAGCTCAAGTCTTCCCAAATTCGCAAAATGAACTTGGAAACATTTGAACAGGTAACCAAGAACCGGTTGAATGCAGTAAAGATTGCTGTGAGAACCCTTTTCGCTGGTGAAAGAATTCTTTGTAACCATGTGTTTTCAGCATCCCATGCAACCATGGAGTCATGCTTTACAGAGATAACTAGAGAAGCAGCAGTCGTTTTATTCAGACTTCCTGAGCTTGTCACTAAGAGCAAGCGTTCACCAGAGAAGATTTTCAGTCTAATGGAACTCTATGAAGCTATCTCAAATCTCTTGCCAGAGATTGAGTCTACATTCAGTTTCAGATCAACAGAAGTAATCAAAGGGCAAGTTCATTCTTCATTGGTAAAGCTTGACGAGTCTATTAAAGCTACTCTAATGGACTTTGAAGCAGCAATTCAGAAGAACTCTTCAAAGTCTCCAATTCTCGGAGGGGCAATTCACCCACTGACTCGATCAACTATGAGCTACATATCCTTACTAGCAGATCATGAAGGAATTCTTTCCACCATTCTTAGTAACCCATTACCAAAGAATTCACCTTTGCCAGAGTCTTACTTTGAAAATCCAAATTCTACTGATGCTTCTACATCAGTAGTATCAGTTCACCTAGCATGGCTCATATTGGTTCTTTTATGCAAGCTTCATAGCAAAGCTAGGCTCTACAAAGATGTGTCATTGGCATATCTATTCCTTGTCAACAATCTTAGTTTCATTGTGGAGAATGTTCGTGCAACCAAATCAATATACCTCCTAGGTGATGATTGGGTGGCTAGACGTGTCAAGAATGTAAAGCTATATGCTTCAAACTGTGAATCAATGAATTGGACAAAGGTTCTCTCAGCTTTACCAGAGAAAGGTTCCAAGAAAATACTGCAAGAATTTTCCATGGCCTGTTTCAGGAAATTTAAAACAGCTTTTGAAGATGCTTATGGGAAACAGATGTCTTGGATTGTTGAGGATGGGAATTTAAGGAATGAACTGAAACTGTCAATAGCATGCAAACTAGTCCCAAAATATAAAGACTTCTATGACATGTATTTGGTGAACTTTAGTGGGGAGAATAATTTGGAGTCATTAGCATGGTTCTCGCCAGATGAACTAGGAAATCACTTGTCATATGCTTCCACCTAG 1326 0.3899 MAGDYAADLKSVSAIALSDLKSIADCMISSGYGKECCMIYKSIRKSIIDKRLNNLGIEQLKSSQIRKMNLETFEQVTKNRLNAVKIAVRTLFAGERILCNHVFSASHATMESCFTEITREAAVVLFRLPELVTKSKRSPEKIFSLMELYEAISNLLPEIESTFSFRSTEVIKGQVHSSLVKLDESIKATLMDFEAAIQKNSSKSPILGGAIHPLTRSTMSYISLLADHEGILSTILSNPLPKNSPLPESYFENPNSTDASTSVVSVHLAWLILVLLCKLHSKARLYKDVSLAYLFLVNNLSFIVENVRATKSIYLLGDDWVARRVKNVKLYASNCESMNWTKVLSALPEKGSKKILQEFSMACFRKFKTAFEDAYGKQMSWIVEDGNLRNELKLSIACKLVPKYKDFYDMYLVNFSGENNLESLAWFSPDELGNHLSYAST* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03527 441 Gene3D Exocyst complex component Exo70 5 438 - -
Rops6g03527 441 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 432 IPR004140 GO:0000145|GO:0006887
Rops6g03527 441 Pfam Exo70 exocyst complex subunit 78 437 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops6g03527 441 SUPERFAMILY Cullin repeat-like 11 437 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03527 Rops-Chr6 60156397 60157722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03527 2 437 EXO70 exocyst subunit family AT2G39380 51.370 4.52e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03527 K07195 - qsu:112015839 511.916