Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03519 ATGTACCAGGCAAAGACTGCTCGGAACAAAGCATTGTTCATGAAGAAGCTAGTGAACCTGAAGCTGAAAAGTAGAGCTTCAGTTACCGAACACACAAGTGAGTTTCAAAATCTGGAGACGCCGGTGGTTTCTCTTGGAAATTCGGCTCCAAAAGGTAAGCTCTTTATGTCCATGGTTAAAGATTCTTTATTTAATGAAAAAGCCAAGAGACAAGAAGATGGTATAGAACAATCCTATGCCTTGGTCACTGAGAATCGAGATCATAACATAAACAAAGAGAGTATTCGCCATTTCTCGTTGTTCTGTGCCTTTGTTTCGGTTACATTTCATCATTCATCGCAAATGGCTCTCGAGGTTTGTGTGAAAGCAGCTGTTGGTGCTCCTAATGTTCTTGGAGACTGTCCATTTTCTCAAAGGGTCCTCTTGACTTTGGAGGAGAAAAAAATCCCTTACAAAACTCACCTCATCGATCTCAGTAACAAACCCCAATGGTTTTTGCAGGTGAACCCAGAAGGGAAGGTGCCAGTGGTTCAGTTTGATGGCAAATGGGTGGCTGATTCTGATGTTATTGTGGGGATTCTCGAGGAAAAATACCCAAAACCCCCTCTTGCCACTCCTCCTCAATTTGCCTCAGTGGGATCAAAGATATTTGGGTCCTTCGTGAGTTTTCTGAAGAGCAAGGATGCAAATGATGGAACTGAGCAAGCATTGGTTGCTGAATTGAATGCTTTGGATGAACATCTTAAGGCCCATGGTCCATATGTTGGTGGGGAGAAGGTCACTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTGGTAGCACTCGGCCACTTCAAGAATTGGACTATTCCTGAGAGCTTGGCACATGTGCACAACTACACCAAGTTGCTCTTCTCCCGGGAATCATTTGAGAAAACCAAGGCTGCAAAGGAATATGTTATTGCTGGATGGGCACCAAAGGTCAATGCATGA 981 0.4383 MYQAKTARNKALFMKKLVNLKLKSRASVTEHTSEFQNLETPVVSLGNSAPKGKLFMSMVKDSLFNEKAKRQEDGIEQSYALVTENRDHNINKESIRHFSLFCAFVSVTFHHSSQMALEVCVKAAVGAPNVLGDCPFSQRVLLTLEEKKIPYKTHLIDLSNKPQWFLQVNPEGKVPVVQFDGKWVADSDVIVGILEEKYPKPPLATPPQFASVGSKIFGSFVSFLKSKDANDGTEQALVAELNALDEHLKAHGPYVGGEKVTAVDLSLAPKLYHLVVALGHFKNWTIPESLAHVHNYTKLLFSRESFEKTKAAKEYVIAGWAPKVNA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03519 326 Pfam Glutathione S-transferase, N-terminal domain 133 202 IPR004045 -
Rops6g03519 326 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 180 326 IPR010987 -
Rops6g03519 326 CDD GST_N_family 134 191 - -
Rops6g03519 326 Gene3D - 204 326 - -
Rops6g03519 326 Pfam Glutathione S-transferase, C-terminal domain 230 296 - -
Rops6g03519 326 SUPERFAMILY GST C-terminal domain-like 197 324 IPR036282 -
Rops6g03519 326 SFLD Glutathione Transferase (cytosolic) 133 300 IPR040079 -
Rops6g03519 326 SUPERFAMILY Thioredoxin-like 133 200 IPR036249 -
Rops6g03519 326 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 115 323 IPR044627 GO:0033355|GO:0045174|GO:0098869
Rops6g03519 326 FunFam Glutathione S-transferase DHAR3, chloroplastic 204 326 - -
Rops6g03519 326 CDD GST_C_DHAR 203 323 - -
Rops6g03519 326 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 124 202 IPR004045 -
Rops6g03519 326 Gene3D Glutaredoxin 115 203 - -
Rops6g03519 326 FunFam Glutathione S-transferase DHAR3 chloroplastic 115 203 - -
Rops6g03519 326 SFLD Main (cytGST) 133 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03519 Rops-Chr6 60100438 60108661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03519 115 326 Glutathione S-transferase Gene Family AT1G75270 78.404 2.60e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03519 K21888 - gmx:100306061 392.119