Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03509 ATGCCAGGGGATGCTGGCTGCTTAGCTGAAGAAAATATGGGATATGAGAACTCAGCCAGAATTGAACCAAAGCGTGGTCGTCAGTGTTTTATAAATACAGGTGAACCAGAAGTATTCAGCAACAACAAGAAACAAGCAGTTGAAGCTGTTAGTGACAGCCCAATTTCAGGAGTTTCCCATGTAAATATTTCTCCATGGGGCACCAATTCAAGGTTTCACTCAGCCACTGGTCAATTTTCTGACCGTCTCTTTGGATCTGAGGTAAGGGCTGCCGATTTGGTTGATAAGAACATGCCATCAGTTGCAAGTGGAAATCTGAACATGGGAAGGAAGGATTTTGAGAGTCAATATGATAATAATCCATCTGTGGGTTTATCGATATCTCATACCATTGAGGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTCAAAGTTAATCAAGTAAGAGATTCTGACGATTGTATGTCTTCATCCATGGGACACTCCTATGGTAGGACTGATAATAGTACAATTTCAGCAGATGTTGACTACATGAAGAATGATGGCAATATATCTTTTGGGCCAACTTACAACAATGGAAATGATAATACTATCTCTATAGGGACCACATTAAATAAGACCGATGACAATCTTGTTTCAATGGGTCATGCCTTAAATAAGGGGGATGGAAGTTTTATGTTGATGGGCCACAACTATGGCAAGGGAGATGAAAATATCTTATCAATGAGTCAGCCATTTAACATGAGAGATGGAAATTTCATATCAATGGGTCAGTCATATGAAAAGGAAGATAGCAATATGATATCTCTGGGTACCTCTTATAACAAGGGGCATGAGAATTTTGCATCAACAATGGGTCTAACCTATAGTAATTCAGGCGAAATTTTCATAACTATTCCAGCTTCCTATGGCAAGGACACTGATCATATAATACCAATAGGTCCAACATATGATAAGGTGGATTCAAGCATTGCATCAAGAGTTCCTTCATATGAAAGAGGAGATTCTAGCTCTTTATGTATGGGCCTCAACCACAATAAGGGTGAGGGAAGTACCATCTCTTTTGGAGGTTTTCATGATGACCCTGAATCAAATCCCTCCGGAGGGACAATTAGTGGGTTTGATCTGTTGATGGGCAACCAGACCTCAGATCAAGGTTTGGATGGCCAGAAGGAGAAGGCTCTGAATAATTCAAACTCTGAACTACCTGTAAATAGCACTGCAAAATCTGATCTCAAGACGGATACTATCCTTAAGAATAAAGAGCCAAAGCTAACGCAGAAGGCTGCTGCTAACAATTTCCCTTCAAATGTTAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTACCTGTGAAATATGTTTCTTGGTCACGGGAGAGAAATCTTGGAGGAATCATAAAGGGAACTGGGTATTTGTGTTCGTGTGATGACTGCAAGCAGTCCAAGGCTCTCAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATACTTTGAAAATGGAAAAACCATCTATGCTGTAGTTCAAGAGCTGAAAAACACTCCTCAGGAGATACTTTTTGATGCAATTCAAAATGTGACTGGCTCTTCCATCAACCAAAAGAATTTTCGTATCTGGAAAGCATCATATCAAGCTGCTACTCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTAATGATACCATCTTGA 1728 0.4022 MPGDAGCLAEENMGYENSARIEPKRGRQCFINTGEPEVFSNNKKQAVEAVSDSPISGVSHVNISPWGTNSRFHSATGQFSDRLFGSEVRAADLVDKNMPSVASGNLNMGRKDFESQYDNNPSVGLSISHTIEDPSSCLNFGGIRKVKVNQVRDSDDCMSSSMGHSYGRTDNSTISADVDYMKNDGNISFGPTYNNGNDNTISIGTTLNKTDDNLVSMGHALNKGDGSFMLMGHNYGKGDENILSMSQPFNMRDGNFISMGQSYEKEDSNMISLGTSYNKGHENFASTMGLTYSNSGEIFITIPASYGKDTDHIIPIGPTYDKVDSSIASRVPSYERGDSSSLCMGLNHNKGEGSTISFGGFHDDPESNPSGGTISGFDLLMGNQTSDQGLDGQKEKALNNSNSELPVNSTAKSDLKTDTILKNKEPKLTQKAAANNFPSNVKSLLSTGIFDGVPVKYVSWSRERNLGGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEILFDAIQNVTGSSINQKNFRIWKASYQAATRELQRIYGKDEVMIPS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03509 575 PANTHER AUTOIMMUNE REGULATOR 6 524 - -
Rops6g03509 575 Pfam Tify domain binding domain 468 523 IPR032308 -
Rops6g03509 575 MobiDBLite consensus disorder prediction 385 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03509 Rops-Chr6 59987977 59990316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03509 427 556 PHD Transcription Factor Family AT3G53680 55.385 3.10e-41 157