Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03497 ATGGATGAGAGGTTAGGTTCAAGTGGTTCAGCAACATCAATCAACGCTTCCAATATAGGATTTCAGCTATTGAAGAAGCAAGGTTGGAAAGAAGGGACTGGTCTTGGGATCTCTGAACAGGGTAGATTAGAACCCGTGGAAACTTATGTGAAGAATAATAAGCGAGGTTTGGGAGCGGATAAAGTGAAGAAAAAGGCTGTGAAACCTGATCACATTGATACCTCTAAAGGGAACAATCAGCAGGAACTTAAAAAGAAAACCAAAGCACTTTCTAAACGGATGAGAAAGATGGAAGAGTACGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGTGCATTCTTTAGAGAGTTCTGGCCAGAAAATGTGTAA 369 0.4092 MDERLGSSGSATSINASNIGFQLLKKQGWKEGTGLGISEQGRLEPVETYVKNNKRGLGADKVKKKAVKPDHIDTSKGNNQQELKKKTKALSKRMRKMEEYEKKMQEKEFERAFFREFWPENV* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03497 122 PANTHER BAT4 PROTEIN-RELATED 7 122 IPR039146 -
Rops6g03497 122 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Rops6g03497 122 SMART G-patch_5 14 60 IPR000467 GO:0003676
Rops6g03497 122 Coils Coil 83 110 - -
Rops6g03497 122 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Rops6g03497 122 MobiDBLite consensus disorder prediction 61 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03497 14 58 C2H2 Transcription Factor Family AT5G26610 51.111 1.48e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03497 - - cam:101497292 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03497 6 59842246 59844259 Rops6g03497 6 59842246 59844259 ECH