Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03489 ATGCTCCAGGGGATTCTGATTCGCAGAAATGGCGGAAATGAGACATGGCCAGAAAACCCACTGCTGCCAAAAGATAACCATGAGAGAGCCTTAGCTCGATTTTGGATTAAATTTGGAGAGGATTCGATTGCTTCTATAACTGATCTGTTTCTCCGACCCTCTAAAGATGAACAAGAAAGGGAAACTGCAATTAAAAAAGCACAAGAGACCATAGCAATAATGGAAGAGCAGGGTCTTGGGGACAAGAAGTTCTTTGGAGGCAACAATATTGGAATGGTGGACATGGCATACGGATACCTTAGTCTTTGGTTGGAAGGCTCGGAGGAAATTGTGGGTATGAAACTGATTGAGCCAAACAAATTTCCTCGGTTGCATGCGTGGATGCAAAATTTTAAGCAAGTTCCTCTTATTAAAGAAAACCTTCCTGATTATGGGAAACTGTTGCTGTATATTGAACGGCGCAGACAGGAATGTAGTACCAGGAATAAATAG 492 0.4228 MLQGILIRRNGGNETWPENPLLPKDNHERALARFWIKFGEDSIASITDLFLRPSKDEQERETAIKKAQETIAIMEEQGLGDKKFFGGNNIGMVDMAYGYLSLWLEGSEEIVGMKLIEPNKFPRLHAWMQNFKQVPLIKENLPDYGKLLLYIERRRQECSTRNK* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03489 163 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 142 IPR045073 -
Rops6g03489 163 CDD GST_C_Tau 27 154 IPR045074 GO:0004364|GO:0006749
Rops6g03489 163 SUPERFAMILY GST C-terminal domain-like 14 156 IPR036282 -
Rops6g03489 163 Pfam Glutathione S-transferase, C-terminal domain 50 132 IPR004046 -
Rops6g03489 163 Coils Coil 57 77 - -
Rops6g03489 163 Gene3D - 25 161 - -
Rops6g03489 163 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 25 163 IPR010987 -
Rops6g03489 163 FunFam Tau class glutathione S-transferase 22 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03489 Rops-Chr6 59650711 59654393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03489 13 162 Glutathione S-transferase Gene Family AT2G29420 34.000 5.05e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03489 K00799 - gmx:547586 252.677