Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03488 ATGAAAAGGAAGGAACGGCGAAGAAGCCAAACTGAGAACCCATTGCTGCCAAAAGATAACCACGAGAGAGCCTTAGCTCGATTTTGGATCAAATTTGGAGAGGATTCGATCGCTTCTATAACTGATCTGTTTCTTCGGCCCTCTAAAGATGAACAAGAAAGAGCAACCGCAATGAAAAAAGCGCAAGACATTATCGCAATAATGGAAGAGCAAGGTCTAGGAGACAAGAAGTTCTATGGAGGCAACAATATTGGAATGGTGGACATAGCATATGGATACCTTAGTCATTGGTTGGAAGGGCTGGAGGAAATTGTGGGTGACAGTGATGGTGTCCTGACCGAGCCACATGCAGATGGAAGTGGATCAGGTGGTTCTGATCCAAAACCATTTGCTACACTTAATGAAATGCCAGAGAAGCAAGCATCCAATACAAGCTGCCAGAATGCCTTGGAATTGAGTGGCACCCCTCTTTGGGGTTTCTCATCAGTTTGTGGAATGAGACAGGAAATGGAAGATGCTATAGCTGTTAAGCCTCAACTTTTTCTAGTCCCTTCATAG 558 0.4444 MKRKERRRSQTENPLLPKDNHERALARFWIKFGEDSIASITDLFLRPSKDEQERATAMKKAQDIIAIMEEQGLGDKKFYGGNNIGMVDIAYGYLSHWLEGLEEIVGDSDGVLTEPHADGSGSGGSDPKPFATLNEMPEKQASNTSCQNALELSGTPLWGFSSVCGMRQEMEDAIAVKPQLFLVPS* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03488 185 MobiDBLite consensus disorder prediction 112 133 - -
Rops6g03488 185 SUPERFAMILY GST C-terminal domain-like 11 106 IPR036282 -
Rops6g03488 185 Gene3D - 13 113 - -
Rops6g03488 185 CDD GST_C_Tau 21 106 IPR045074 GO:0004364|GO:0006749
Rops6g03488 185 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 19 157 IPR010987 -
Rops6g03488 185 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 117 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03488 Rops-Chr6 59625304 59628263 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03488 12 106 Glutathione S-transferase Gene Family AT2G29420 37.895 1.33e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03488 K00799 - gmx:547586 170.629