Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops6g03469 | ATGTCTCGGACATCCAGTGTCCCGCCTGCCTTCCAGTCCATTAAATCATTGCCTCCTGAGTTCAAGTTTACTAATAATTCAAAGCCTGATGCTGTGGATAAACATGGAAATATTAAGTTGAGAAGTACTGATCCGATTGGATTGAATGGTCCTGAAAATGGTGCACTAGTAGGGGAGGTTTCTAAGGAAGTTCACAACCGTGCTGGTGACATGGATATTTTTGATGAGGAATCACCATATGGTGGAAAAGGTAGATCATTTGAAGACAGACCATCGAATGCTGATGAAGACTTGGTATCTGTTTCGCGGCCCCTCCAATCAATTTCAACGTCCTCTAGGGAAAGCAGATGGAGTGATACAACTCCATATGCTTCAAAGAAGAAGCTTCAGTCATGGCTTCAACTTCCTAATGGGGATTGGGAGCTGGTGAAGATAATAACAACTTCTGGAACAGAATCTGTCATTTCGCTGCCTGATGGGAAAGTTTTAAAGGTGAAAGATGAAAATTTGGTACCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGGCAGTTTTATACAATCTGCAATATAGATACAACCAAAATATGATTTATACGAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTTAAAAAAGTTCCTCTGTATGGTAATGACTATATTGAAGCTTACAAGTGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCAAAGAAATGATACGGGATGAAGTTAATCAATCAATAATTATCAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTAGCTGCCCTTGGTGGTGGAAGTGGAATAGAATATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGGGAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCACTGAGATTCACTTCAGTGAAACTGGAAAAATATCTGGTGCTAATATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCGTCTCTCCGGGAGAAGCTAAATCTCCAAAATGCGGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTGTTGATGATGCAGAAGAATTTCACATGGTCATGGAAGCTCTGGATGTTGTCCACATTAGCAAAGGAGACCAGGAGAATGTATTTGCTATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTCAGTGCTGCCAAATTGATTGGCTGTGACATTGAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTCGGTAATGATATTATTGTCCAGAAGTTGACACTATCTCAGGCTACTGATGCAAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGCTGGTTGAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACTGGCAGATCTATCAGTATTCTAGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTTTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAAACCACTGGGGCTACTATCTCTGTTAGATGAAGAGTCTACTTTCCCAAATGGCTCAGATTTAACATTTGCCGACAAGCTTAAACAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACATATGATACAACTGGATTCTTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCAAGCATATGTCATCTTCCTCAGGTATTTGCATCCCAGATGCTTACTCAGTCTGAGAAGCCTGTAGTTGGTCCCTTGCACAAGTCAGGTGGCGCAGATTCCCAAAAGCTTAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAATTGATGCAACGTTTAGAGAGTACTACACCACATTTTATTCGCTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATATGAACAAGGCCTTGTACTGCAGCAGTTGAGATGCTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTCCTTCTCCTTGAAAGTGTCGCATCTCAGGATCCACTCAGTGTTTCAGTTGCCATTCTTCATCAGTTTAACATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTCTTCCGAACAGGGCAGATTGGAGTGCTTGAAGATACTAGAATCCGGACCCTCCATGGCATTTTACGTGTGCAAAGTTGCTTCAGAGGTTACCAAGCTCGTTGTCATCGCAAGGAGCTTTGGAGAGGAATCACTACTCTTCAGTCATTTATTAGGGGAGATAGAAGCAGAAAGGAATATGCAGCTTTGTTTCAGAGACATAGAGCTGCTGTTATTATACAGAAGCGGATGAAAACAACATTTGCAAGAAACAGAATGAAGGCTACTCATGATGCTGCAGTTGTCATACAATCATTTATTCGTGGTTGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTGATAAAATCCGTAGGATCGAAGACCAATGAGTCAGATGAGGTTCTGGTGAAGTCTTCTTTCCTTGCAGAATTACAACGGAGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCACCAACGTCTTCAACAGTATGAGAACAGATGGTCTGAATATGAATTGAAAATGAAATCCATGGAAGAAGTATGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGAAATTCAGACGCATCTGTTAATGCAAGTGATGATAGGGATTTCAGCTGGGGTATAACAAGTAATCACAGGCGCCAAGAAAGCAATGGAACAAAATCTATGAGTGCTGGTTTGAGTGTTATAAGTAGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTCTTTGGTGATGATGCTAAGTTCTTGGTTGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGACCGCGAGCTTAGAAGGTTAAAACAGATGTTTGAATCTTGGAAGAAGGATTACGGTGCAAGATTGCGAGAAACAAAGGTCATTTTACATAAACTTGGAAGTGAAGATGGTTCAATTGAGAAAGTGAAGAAGAAATGGTGGGGAAGAAGGAATAGTACAAGGATAAATTGA | 3531 | 0.4033 | MSRTSSVPPAFQSIKSLPPEFKFTNNSKPDAVDKHGNIKLRSTDPIGLNGPENGALVGEVSKEVHNRAGDMDIFDEESPYGGKGRSFEDRPSNADEDLVSVSRPLQSISTSSRESRWSDTTPYASKKKLQSWLQLPNGDWELVKIITTSGTESVISLPDGKVLKVKDENLVPANPDILDGVDDLMQLSYLNEPAVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKCKAIESPHVYAITDTAIKEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLTEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQNAEDYKYLRQSNCYSITGVDDAEEFHMVMEALDVVHISKGDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFSAAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQATDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGSDLTFADKLKQHLNSNSCFKGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSICHLPQVFASQMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLESVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRIRTLHGILRVQSCFRGYQARCHRKELWRGITTLQSFIRGDRSRKEYAALFQRHRAAVIIQKRMKTTFARNRMKATHDAAVVIQSFIRGWLVRRCSGDIGLIKSVGSKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDRDFSWGITSNHRRQESNGTKSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFESWKKDYGARLRETKVILHKLGSEDGSIEKVKKKWWGRRNSTRIN* | 1177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops6g03469 | 1176 | FunFam | Myosin heavy chain | 361 | 417 | - | - | |
Rops6g03469 | 1176 | ProSiteProfiles | IQ motif profile. | 925 | 953 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | SMART | iq_5 | 875 | 897 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | SMART | iq_5 | 852 | 874 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | SMART | iq_5 | 924 | 946 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | SMART | iq_5 | 901 | 923 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | Gene3D | - | 547 | 741 | - | - | |
Rops6g03469 | 1176 | ProSiteProfiles | IQ motif profile. | 855 | 882 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | Gene3D | - | 361 | 420 | - | - | |
Rops6g03469 | 1176 | Gene3D | Kinesin motor domain | 182 | 780 | IPR036961 | - | |
Rops6g03469 | 1176 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Rops6g03469 | 1176 | Gene3D | - | 856 | 903 | - | - | |
Rops6g03469 | 1176 | Gene3D | - | 904 | 945 | - | - | |
Rops6g03469 | 1176 | Coils | Coil | 971 | 1019 | - | - | |
Rops6g03469 | 1176 | Gene3D | - | 784 | 852 | - | - | |
Rops6g03469 | 1176 | ProSiteProfiles | Myosin motor domain profile. | 179 | 851 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | Pfam | Myosin head (motor domain) | 181 | 839 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | FunFam | Unconventional myosin-XIX | 549 | 741 | - | - | |
Rops6g03469 | 1176 | PANTHER | MYOSIN | 172 | 1170 | - | - | |
Rops6g03469 | 1176 | ProSiteProfiles | IQ motif profile. | 878 | 905 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 126 | 175 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | MobiDBLite | consensus disorder prediction | 1 | 120 | - | - | |
Rops6g03469 | 1176 | Pfam | IQ calmodulin-binding motif | 926 | 943 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | Pfam | IQ calmodulin-binding motif | 857 | 872 | IPR000048 | GO:0005515 | |
Rops6g03469 | 1176 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 153 | 900 | IPR027417 | - | |
Rops6g03469 | 1176 | MobiDBLite | consensus disorder prediction | 99 | 120 | - | - | |
Rops6g03469 | 1176 | SMART | MYSc_2a | 173 | 852 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | CDD | MYSc_Myo8 | 193 | 839 | IPR036022 | - | |
Rops6g03469 | 1176 | PRINTS | Myosin heavy chain signature | 590 | 618 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | PRINTS | Myosin heavy chain signature | 537 | 565 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | PRINTS | Myosin heavy chain signature | 209 | 228 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | PRINTS | Myosin heavy chain signature | 305 | 332 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | PRINTS | Myosin heavy chain signature | 263 | 288 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Rops6g03469 | 1176 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 422 | 719 | - | - | |
Rops6g03469 | 1176 | MobiDBLite | consensus disorder prediction | 63 | 96 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops6g03469 | Rops-Chr6 | 59364942 | 59379338 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops6g03469 | 7 | 1174 | Myosins gene family | AT1G50360 | 75.897 | 0.0 | 1808 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops6g03469 | - | - | gmx:100801124 | 2132.07 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops6g03469 | 6 | 59364942 | 59379338 | Rops6g03469 | 6 | 59364942 | 59379338 | ECH |