Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03451 ATGATGTTGATGCATTGCCATGAATTGTGCAACCCAGTTTCTATGATGGTTCTTGTTAACTTAGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGATTACATGTCCATTGTAACATATCGACAGGCAATTTCATTTATCTTCCTGGCACCTATTGCCTGTTTCTATGAAAGGAAACACAAACTGGAGGCTCGCATAATATGTCTCCTTTTCCTCTCTGCTCTTGTTGGAGTAACACTACCCCAATACCTGTTTCTTCTTGGACTTGAATATACATCTGCCACTTTCTCATGTGCATTCCTCAACATGGTGCCTGTATTTACTTTCATTACGGCACTGCCTTTTGGGATAGAGAAGGTGAACATGAAAAGGCAAAGTGGCAAAGCCAAAGTCTTGGGAACTTTCGTGTGCATTGGTGGAGCTTTGTTATTGGTCCTTTACAAAGGAATGGTCTTGATCAACCCACAATCAAAACACATGGCAAACACATCTATAAGTACTCCTCCAGCTGCCAAGTTAGAGAAATGGATTATAGGTTCGATGATTCTGACTGCAGGCTGCTTCTTGTGGTCTTCATGGTTTATTATACAAGCAAAGATTAGCAAAAAATATCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCAATTCAATCAGCAATATCAACTTTGGTCATCAAGAGAAATAATGCCTCGTGGGTTCTCAAAGGAAAGCTAGAAATATTAAGTGTCATATATTCTGGATCAGTGGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCACTTATACAGATATTTGTGGCTGTGCTTGATTTCTCTATACTAAAGGAGGAAATTTACATGGGAAGTGTTGCAGGATCAGTCTTGGTTATTGCTGGCATGTACATTCTTCTGTGGGGAAAAAGTAAAGAGGCAGAGCAATGTGTCCTTGAGGATACACAAGCAAATGAAGATGTAGAATGTCAATAG 1041 0.3996 MMLMHCHELCNPVSMMVLVNLALAFVNLLLKKVLNEGMDYMSIVTYRQAISFIFLAPIACFYERKHKLEARIICLLFLSALVGVTLPQYLFLLGLEYTSATFSCAFLNMVPVFTFITALPFGIEKVNMKRQSGKAKVLGTFVCIGGALLLVLYKGMVLINPQSKHMANTSISTPPAAKLEKWIIGSMILTAGCFLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAISTLVIKRNNASWVLKGKLEILSVIYSGSVGSGLCYVAMSWCVKQRGPVFTAAFTPLIQIFVAVLDFSILKEEIYMGSVAGSVLVIAGMYILLWGKSKEAEQCVLEDTQANEDVECQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03451 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Rops6g03451 346 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
Rops6g03451 346 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Rops6g03451 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Rops6g03451 346 PANTHER WAT1-RELATED PROTEIN 12 329 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03451 Rops-Chr6 59253010 59255159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03451 8 258 Nodulin-like Gene Family AT3G30340 49.407 2.75e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03451 - - gmx:100802053 577.015