Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03446 ATGGTGATGGTGGCGATGGAGGACAACGAGAGCTGCGGTAGTTTAGTGCACCACCGCACGTCTAATACGACGTCGTCTCCGTCACAAAACCGGCAACAGCGTCAGAAGGTGGAAGTGTACAATGAGATTCTTCGCCGGTTGAAGGATTCCGGTAACGAAGAGGCTATGCAACCTGGCTTCGACGATCAACTTTGGGCTCACTTCAATCGTCTTCCCTCACGGTATGCGCTAGATGTGAATGTGGAAAGGGCGGCAGATGTTCTCATGCATAAGAGATTACTGCATCTGGCACATGATCCTGCTAATAGACCTTCAATTGAAGTTCGCTTAGTCCAGGTTCATCCCATATCTGATGGAAACTCAGCTGACTCTTTCCAGTCAGATGCTCCTGGAATAGAATCAGATCAAAGCTCTTCAAAGTACTCAAACAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCCCTGGCTCTTGAAGCAAATAATTCTGAAGGCATAGAGGAGGAACATTCTGTACATGCCAGTGTACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGATGACAAGCCAAAGCTTCTCAGTCAGTTGACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCACATGCCTTTTCCACAACTGATGGTTATTCATTAGATGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTTAAAGCAGCTTTGGAAAAAGAACTCTTGAAGATTGAGAGACAGGTGGGGTCCAATCAGCAATCAGTATCGTCTGTTGATGAACCTGATCAAGCAAGGATGAAAAATGAACTAGATCATCTTACAATTCCAAATGATGGGACAGACGTCTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGCTCATATGGTGAACTATTTAAAGGTACATATTGTAGCCAGGAAGTAGCCATCAAAGTTCTCAAGGCTGAGCATGTAAATTCAGAAATGCAGAGAGAGTTCGCACAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTGCAATTCATAGGAGCATGTACCAAGCCCCCACGCTTGTGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACCTACATAAGCAGAAGGGTTTTTTCAAATTTCCTACCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGAATGAACTACTTGCACCAACATAACATAATCCATAGAGACTTGAAGGCTGCCAATCTTTTGATGGATGAAAATGGCGTTGTAAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATATGAATATTTGACCCCTCTACAGGCAGCTATCGGAGTGGTGCAAAAGGGTTTACGGCCCACCATTCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATCCAACATTGAGACCTGATTTCTCTGAAATTATCGAGATCCTGCAGCAGTTAGCTAAGGAGGTTGGAGATGAAGGAGAGGAGCGGCGCAGGGATAAATCAGGAGGACTTCTATCTGTCCTCAGACGAGTTATTACAAGTGCTATAGCATGCTTAACACGCTGCTGGTTGGCGAAATGA 1791 0.4411 MVMVAMEDNESCGSLVHHRTSNTTSSPSQNRQQRQKVEVYNEILRRLKDSGNEEAMQPGFDDQLWAHFNRLPSRYALDVNVERAADVLMHKRLLHLAHDPANRPSIEVRLVQVHPISDGNSADSFQSDAPGIESDQSSSKYSNRQSIHPPPAFGSSPNLEALALEANNSEGIEEEHSVHASVQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKAALEKELLKIERQVGSNQQSVSSVDEPDQARMKNELDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGTYCSQEVAIKVLKAEHVNSEMQREFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQKGFFKFPTLLKVAIDVSKGMNYLHQHNIIHRDLKAANLLMDENGVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIEILQQLAKEVGDEGEERRRDKSGGLLSVLRRVITSAIACLTRCWLAK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03446 596 Gene3D - 188 260 - -
Rops6g03446 596 Gene3D Transferase(Phosphotransferase) domain 1 382 573 - -
Rops6g03446 596 ProSiteProfiles ACT domain profile. 190 269 IPR002912 -
Rops6g03446 596 MobiDBLite consensus disorder prediction 15 36 - -
Rops6g03446 596 Coils Coil 240 260 - -
Rops6g03446 596 SUPERFAMILY ACT-like 188 253 IPR045865 -
Rops6g03446 596 FunFam serine/threonine-protein kinase HT1 382 572 - -
Rops6g03446 596 ProSiteProfiles Protein kinase domain profile. 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03446 596 Gene3D Phosphorylase Kinase; domain 1 293 381 - -
Rops6g03446 596 CDD ACT_TyrKc 188 255 - -
Rops6g03446 596 MobiDBLite consensus disorder prediction 119 157 - -
Rops6g03446 596 MobiDBLite consensus disorder prediction 119 152 - -
Rops6g03446 596 SUPERFAMILY Protein kinase-like (PK-like) 288 552 IPR011009 -
Rops6g03446 596 SMART serkin_6 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03446 596 CDD STKc_MAP3K-like 309 552 - -
Rops6g03446 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Rops6g03446 596 PRINTS Tyrosine kinase catalytic domain signature 377 390 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 PRINTS Tyrosine kinase catalytic domain signature 479 501 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 PRINTS Tyrosine kinase catalytic domain signature 460 470 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 PRINTS Tyrosine kinase catalytic domain signature 523 545 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 PRINTS Tyrosine kinase catalytic domain signature 414 432 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 Pfam Protein tyrosine and serine/threonine kinase 303 552 IPR001245 GO:0004672|GO:0006468
Rops6g03446 596 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 559 - -
Rops6g03446 596 MobiDBLite consensus disorder prediction 7 36 - -
Rops6g03446 596 FunFam Serine/threonine-protein kinase isoform 1 293 381 - -
Rops6g03446 596 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03446 Rops-Chr6 59153750 59161283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03446 7 580 MAP Kinase Kinase Kinase AT4G35780 65.972 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops6g03446 PK_Tyr_Ser-Thr 4.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03446 - - gmx:100805180 1022.31