Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03417 ATGTTATCAGAGTTGATGAACTGTTTGAGGGCCTGCTTTCGGCCGGGTTCAGATGGATATGCACGCACGAGTTCAGATGGTGGAGGTAGACAAGATGGACTATTGTGGTACAAAGACTTGGGGCAGCACTTGAATGGTGAATTTTCAATGGCTGTAGTACAAGCCAATAACTTGTTGGAGGATCAGAGCCAGATTGAATCAGGCAATTTGTGCTCCAATGAGTCTGGCCCTTATGGAACCTTTATTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCACGGTTTATCAATAATCACCTATTTCACCATCTCAGGAGATTTACTTCAGAGCAACAATCAATGTCAGTGGATGTAATTCGCAAGGCATTCCAAGCAACAGAAGAAGGGTTTATGTCACTGGTTGCCAGACAGTGGTCGATAACACCACAAATTGCAGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAACGGAACCCTCTATATAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGACTAGTCAAGGCAACTGGCGAGGTTTTAGCCATGCAATTATCAACAGAGCACAATGCATCGATAGAGTCTATAAGACAGGAGCTGCATTCTATGCACCCTGATGATTCAAATATTGTTGTTTTAAGGCATAATGTATGGCGTGTGAGGGGCCTTATTCAAGTTTCTAGATCCATTGGCGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCATTATATGCTAAGTTTCGACTTCGTGAGCCATTCAAGAGGCCAATACTGAGCTCAGAACCGTCAATATCAGTGCATCAGTTGCAGCCACATGATCAATTTATTATATTCGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAATTCAAAATAGTCCCCGCAGTGGAAGTGCAAGGAGACTGGTGAAAACTGCACTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATACAGATCTAAAGAAAATTGACCGTGGAGTTCGTCGGCATTTCCATGATGACATCACTGTGATTGTTGTGTTTCTTGACTCAAATCTCATGAGTAGGGCAAGCACTGTCAAGTTCCCTAGTATTTCTGTCAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCAACAGAGATTGGTGGTGCCTAA 1182 0.4357 MLSELMNCLRACFRPGSDGYARTSSDGGGRQDGLLWYKDLGQHLNGEFSMAVVQANNLLEDQSQIESGNLCSNESGPYGTFIGVYDGHGGPETSRFINNHLFHHLRRFTSEQQSMSVDVIRKAFQATEEGFMSLVARQWSITPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRLVKATGEVLAMQLSTEHNASIESIRQELHSMHPDDSNIVVLRHNVWRVRGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVHQLQPHDQFIIFASDGLWEHLSNQEAVDIIQNSPRSGSARRLVKTALQEAAKKREMRYTDLKKIDRGVRRHFHDDITVIVVFLDSNLMSRASTVKFPSISVRGGGINLPHNTLAPTEIGGA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03417 393 CDD PP2Cc 48 355 IPR001932 -
Rops6g03417 393 PANTHER PROTEIN PHOSPHATASE 37 353 IPR015655 GO:0004722|GO:0006470
Rops6g03417 393 Gene3D - 38 365 IPR036457 -
Rops6g03417 393 SMART PP2C_4 41 353 IPR001932 -
Rops6g03417 393 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Rops6g03417 393 Pfam Protein phosphatase 2C 66 325 IPR001932 -
Rops6g03417 393 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Rops6g03417 393 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Rops6g03417 393 FunFam Phosphatase 2C family protein 36 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03417 Rops-Chr6 58828734 58834157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03417 1 387 PP2C-type Phosphatase Gene Family AT4G38520 74.160 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03417 - K01102 gmx:100794801 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03417 6 58828734 58834157 Rops6g03417 6 58828734 58834157 ECH