Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03384 ATGGAGCTTTCTGCATTCCCCAGTTTTAGAGATGTTTCTAATGCTTCCTTGTTCCCATTTTTCTCGAATCAATTTTGTTGTCCATGCTCTCTTCGTCTTCCTCCCCGCAATTATGGCTTTCGTTGGAGTCACAATCCAAAACTGTTTGTTCGGATCAGGATGTGCTCGGAGAAAGGTTCTTCTTCTAACGGTTACGGCGGAATCGAGAGAGGAGAAGCGAAACCTGATTTCATCGATGTGATTGGCATTGGCAGTAGGAAGGACGCGGTTCTCGATTTCTGCTTGAACTCTCCGTTTCAGTTATCATCGCTGCGGTTCTGGAATATCCTTATGAAAGAATCACAAGAGGTGCAATTACAGCAAAGGTCAATTAGAGAAGAACCTTGCCCAGGAATTGTCAAAGCTGCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGTGCAGGATATGGATTGGACCACACTGTTGCAGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGATTGACAGTTGCTATAGTTTTGAAGCCTTTTAGCTTTGAAGGGCTAAGACGACAAGATGAGGTGAAAGCTTTGATGGCGAAACTTAAGGAGAACACTAATTTACTTATTGAAATTGATATTGATGCACTGCTCCAAAAAGACTTGTTGACTCTAGATGAGGCTATCAAAACTGCAAATGATGCAGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCTGAGATGCACAGAAAATTTATAGATAGATTGCATGATAGCATGAAAGAAGCTGGCACTTCAGAAATCGATAAAATATTGGGTTGCTATAAAGAAGCAAGAATTGGATTTGGAGCTGCATATAATATCAAAACCTCAATTTTGCAGTCAATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGCGTAGTTATATGCATTCTTGCGGGTTCTGTACCCATCGATGATAGTGATATAGCAGTCTTTCTCCGTACTTTCCGTCAAACAACAGAATACACAAGGGATATTATAATATCAACAGTACTTGAGCCTGGTGTCGAGCCCAACCTATTGATAACAACAGTCCTCATGCTTGGCAGTTCAAATGTGCAGCAGTCTTCCCAGAATGGTGGCATACTGTCCAGACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGGAAACATAAGCAGCAACAAATTGGCACTGGGAAAGAAAAAGCAGTATGTCATGAAGTGATGGGCTCTTATGACATTGATGAGGGGGCAAATAGGATTGCTCCCGATGTTATAGATGACAGGTTTGACAAGTACCATGAAGACTTGGAACCAGCAGTGAGCAGCAACAGCTCAAAGTTGTATGCTTCAAGGGATTTTGAAAAAAATGAAGAAGATTTATTTGATTCCATAGCAAATTATCCTATACTTTCCATTACTGAAGAAGTTGCATTAGGAGACTCCTCTTTTCAGAGGGAGCAACTTGAAAACTGGAATCTTGGTCCTGGCTTTGAAGTGGCAAAGGAATGGGCCCAAGAAAGGGCAGCTGATGCTACACACATGATTGATAACCTAAGCATCTTTCACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGGTGAAAGACTGTGTAGAAATCTCATTTATGACAAAACAGCATGAGCTGGAAACTGATAATGAGGTGATAGTACCAACATTGAATGGAGGTTTGTCTCCTTGGAGTGCAGTGACTGATTCAAGTCTGGAAGCAGTCATGGAATTTGCCTCTTCACTTTTGAAGGGAAAGTATGCTAATAATAAACCAAAGAAGGATGGGGTTCTATCTGTGCGTGCTGCATCTATGCTGGAGGCGGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATACAGGGGAGGAAGATACAAGGGGCGATGCCAAGGAGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTGGAGATGGAAATATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGTACATTCTATTTCAAAAACGGAGATGTGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAAGGAAAAGCTAATGGTGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTTGGCATTTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGTATTAAGGCTAATGGAACAAGGTACACTGAAATTTGGGAACATGGTGTTCTTTTAGACACCAAGCACCTGAACAGATGA 2322 0.419 MELSAFPSFRDVSNASLFPFFSNQFCCPCSLRLPPRNYGFRWSHNPKLFVRIRMCSEKGSSSNGYGGIERGEAKPDFIDVIGIGSRKDAVLDFCLNSPFQLSSLRFWNILMKESQEVQLQQRSIREEPCPGIVKAAVFMKSCSKTIVLVASAGYGLDHTVAVDIFETVRSTNGLTVAIVLKPFSFEGLRRQDEVKALMAKLKENTNLLIEIDIDALLQKDLLTLDEAIKTANDAVLLAIKAISVLKSEMHRKFIDRLHDSMKEAGTSEIDKILGCYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSVVICILAGSVPIDDSDIAVFLRTFRQTTEYTRDIIISTVLEPGVEPNLLITTVLMLGSSNVQQSSQNGGILSRLALHFPLVFSFWGKHKQQQIGTGKEKAVCHEVMGSYDIDEGANRIAPDVIDDRFDKYHEDLEPAVSSNSSKLYASRDFEKNEEDLFDSIANYPILSITEEVALGDSSFQREQLENWNLGPGFEVAKEWAQERAADATHMIDNLSIFHLPVGVRPSEEVKDCVEISFMTKQHELETDNEVIVPTLNGGLSPWSAVTDSSLEAVMEFASSLLKGKYANNKPKKDGVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLGDGNIYDGLWRYGKRSGPGTFYFKNGDVFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGIFKDGWRHGQFLCIKANGTRYTEIWEHGVLLDTKHLNR* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03384 773 Pfam MORN repeat 646 662 IPR003409 -
Rops6g03384 773 Pfam MORN repeat 687 709 IPR003409 -
Rops6g03384 773 Pfam MORN repeat 664 686 IPR003409 -
Rops6g03384 773 Pfam MORN repeat 734 745 IPR003409 -
Rops6g03384 773 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 103 763 - -
Rops6g03384 773 SMART morn 662 683 IPR003409 -
Rops6g03384 773 SMART morn 639 660 IPR003409 -
Rops6g03384 773 SMART morn 685 706 IPR003409 -
Rops6g03384 773 Gene3D Tubulin/FtsZ, GTPase domain 116 368 IPR036525 -
Rops6g03384 773 Gene3D - 637 692 - -
Rops6g03384 773 Gene3D - 693 741 - -
Rops6g03384 773 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Rops6g03384 773 PRINTS Cell division protein FtsZ signature 267 288 IPR003008 GO:0005525
Rops6g03384 773 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 244 IPR036525 -
Rops6g03384 773 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 638 764 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03384 76 772 PP2C-type Phosphatase Gene Family AT1G75010 47.293 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03384 - - gsj:114371951 1217.22