Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03343 ATGGCGGTTGAAGGTTTGGCTGACACGAAGGTCCTCATCGGCCAAGTAATCACCGGCCGGTGGTTCGTGGTTGTTACCTCCTTCCTAATCATGGCAGCCTCCGGAGCCACCTACATGTTCAGCCTCTACTCCGGCGACATCAAAACTTCACTTGGTTACGACCAAACCACTTTAAATCTCCTTAGTTTCTTCAAAGACTTGGGTGGCAACCTCGGAGTCCTCTCTGGACTAATCAACGAGATAACACCACCATGGGTGGTGCTTGCCATGGGTTCCATTCTCAACTTCTTTGGATACTTTATGATATGGCTTGCAGTAACAGGAAGAATAGCAAAGCCTCAAGTGTGGCACATGTGTCTCTATATTTGCATAGGTGCTAACTCTCAATCTTTTGCCAACACTGGTTCACTTGTTACTTGTGTTAAGAACTTCCCACAAAGTCGTGGGGTTGTGTTGGGTATACTCAAAGGCTATGTGGGTCTTAGTGGTGCCATCATAACACAACTCTACTTTGCTTTTTATTATAATGATTCCAAGGCTTTGATTTTGCTCATAGCTTGGCTTCCTGCTGCTATATCCTTTGCTTTTCTTCGAACCATTCGATACATGAAGCCGGTTAGTCAACCTAATGAGCTTCGTGTTTTCTATAAGTTTTTGTTCATTTCGCTTGGTCTTGCTGGGTTTTTGTTAGTTATGATCTTAGTGCAGAAAAAGGTCTCTTTTAATCAGAGTGAGTATGGTGTAAGTGCTGGGGTGGTGCTTTTCTTGCTCTTCCTCCCTTTCGCTGTTGTTTTTGTTGAACAGTTTAAGATCCAACAGAGTCAAAAGCTTGCTTTTGTTGATCCCTTTCCGGTGAAAATAGTAACTGAAGGCGAGAAGGTTAAACAAGAGGAGTCTTCAAATGGTAACTCTCTTTCAGCAACATTTCCCACTGAAGAAACTAGATGGTGGCAAAATATTTTTAGCCCACCTGAAAGAGGTGAAGACTATACCATACTTCAAGCCCTTTTCAGCATAGACATGATATTAATCTTCTTTGCTGGCACTTGTGGTGTTGGAGGCACTTTGACTGCAATTGACAATCTGGGTCAGATTGGAACCTCGCTTGGATACCCCAAAACAAGCATAAGCACATTTGTGTCACTTGTGAGCATTTGGAATTATCTAGGACGAGTTTTTTCCGGGTTTGCTTCTGAATATTTTTAA 1206 0.4279 MAVEGLADTKVLIGQVITGRWFVVVTSFLIMAASGATYMFSLYSGDIKTSLGYDQTTLNLLSFFKDLGGNLGVLSGLINEITPPWVVLAMGSILNFFGYFMIWLAVTGRIAKPQVWHMCLYICIGANSQSFANTGSLVTCVKNFPQSRGVVLGILKGYVGLSGAIITQLYFAFYYNDSKALILLIAWLPAAISFAFLRTIRYMKPVSQPNELRVFYKFLFISLGLAGFLLVMILVQKKVSFNQSEYGVSAGVVLFLLFLPFAVVFVEQFKIQQSQKLAFVDPFPVKIVTEGEKVKQEESSNGNSLSATFPTEETRWWQNIFSPPERGEDYTILQALFSIDMILIFFAGTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFASEYF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03343 401 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 401 - -
Rops6g03343 401 Pfam Nodulin-like 20 265 IPR010658 -
Rops6g03343 401 SUPERFAMILY MFS general substrate transporter 21 266 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03343 Rops-Chr6 57907167 57908372 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03343 10 401 Nodulin-like Gene Family AT2G39210 67.342 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03343 - - gmx:100808975 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03343 6 57907167 57908372 Rops6g03343 6 57907167 57908372 ECH