Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03342 ATGCTCACTTTGACTCTGTTATTATCCTGTGTTGGTCACCTTCTCATAGCCTTCAATGTGCCCAATGGTCTCTACGTGGCTTCAGTAATCATTGGGTTTTGTTTTGGTGCACAATGGCCCTTGGTTTTTGCCATAATTTCAGAGCTGTTTGGGCTAAAGTATTATTCAACTTTGTACAACTTCGGTGGGGTAGCGAGCCCAATTGGGTTATATGTGCTTAATGTGAGGGTCACTGGGCATTTGTATGACAAAGAAGCTAAGAGCCAAATGGCAGCAGCAGGGGTTTCAAGAAAGGTTGGTCAAGAATTGAATTGCATTGGGACCAGTTGCTTCAAGTTGTCTTTTGTTATTATCACTGCAGCAACCTTTTTTGGTGCCATTATTTCTCTCATTTTGGTGGCTAGAACCATTAAGTTTTATAAAGGTGACATGTATAAGAGGTACCGGGAGCAGGTTGAAGGAGCCACGGCTGAGATGGCGGTGGTCCAAAACGGCGGCAAGAGAGAACAAGAAGCCAAGGTTGGGATGTGA 531 0.4426 MLTLTLLLSCVGHLLIAFNVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYVLNVRVTGHLYDKEAKSQMAAAGVSRKVGQELNCIGTSCFKLSFVIITAATFFGAIISLILVARTIKFYKGDMYKRYREQVEGATAEMAVVQNGGKREQEAKVGM* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03342 176 Gene3D MFS general substrate transporter like domains 1 141 IPR036259 -
Rops6g03342 176 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 146 - -
Rops6g03342 176 SUPERFAMILY MFS general substrate transporter 2 140 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03342 Rops-Chr6 57907161 57909067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03342 1 151 Nodulin-like Gene Family AT2G39210 74.834 1.57e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03342 - - gmx:100808975 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03342 6 57907161 57909067 Rops6g03342 6 57907161 57909067 ECH
Rops6g00986 6 23764978 23767064 Rops6g03342 6 57907161 57909067 ECH