Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03323 ATGAGTCTTCTTCAAGTTAAACCAATCTTTTTCACTCTCATTACATTAGCACTTATTTCAATTACAAAACTCTTGTGTTCTCACTTTTCTATACCTTTCCCTCAATCTTATCTCTCAATTGCTGGTGCCACCCTCATCTTATACCTTTTCTCCTCAAACACCAAGCACTCTACCAATCTCCCTCCAGGTCCTCTCTCTTTCCCTATATTTGGCAATTGGCTTCAAGTTGGCAATGACCTCAATCACCGTCTTCTAGCATCCTTGTCACAAACCTATGGTCCTGTTTTCCTACTCAAACTTGGTTCCAAAAACTTGGTTGTGGTCTCTGATCCTGAACTTTCCACCCAAGTGCTCCACTCACAAGGTGTAGAATTTGGTTCTCGCCCACGAAATGTTGTGTTTGATATCTTCACTGGAAATGGACAAGACATGGTTTTCACAGTGTATGGTGATCACTGGCGCAAAATGCGTAGAATAATGACATTGCCCTTTTTCACCAACAAGGTTGTTCACAATTATAGTCCCATGTGGGAAGAAGAGATGGATTTGGTGGTTCACGACGTCAAAATTAATGAGAGAGTGAGAAGTGAAGGGATAGTTATCAGAAAACGTCTTCAGTTGATGTTGTACAACATCATGTATAGGATGATGTTTGATACCAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTCAAGCCACACGATTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAATACAATTATGGAGATTTTATACCATTGCTTAGGCCATTTCTGAGGGGCTACCTTAACAAGTGCAAGGACTTGCAAACTAGGAGGTTGGCTTTTTTCAACAACTACTACATTGAGAAAAGAAGGAAAATAATGGCCGCCAACGGGGACAAGCATAAGATCACCTGTGCAATTGATCACATCATAGATGCTCAAATGAAGGGAGAAATCAGTGAAGAGAATGTGATTTACATAGTAGAAAACATTAATGTTGCAGCAATAGAGACAACATTATGGTCCATGGAATGGGCAATAGCAGAGTTGGTTAATCATCCAACCGTTCAAAGCAAGATCCGTGATGAGATATCAAAAGTGCTTAAAGGGGAACAAGTTACAGAATCCAACCTACATGAACTACCATATTTACAAGCCACAGTGAAAGAGACATCAAGACTTCACGCCCCAATTCCTTTGTTGGTACCCCACATGAACCTTGAAGAAGCAAAGCTAGGAGGGTTTACAATTCCTAGAGAGTCTAAGGTGGTAGTGAATGCTTGGTGGCTTGCTAACAACCCATCTTGGTGGAAAAATCCAGAGGAATTTAGGCCAGAAAGGTTCTTGGAAGAGGAACATGGGACAGATGCTGTTGCAGGAGGGAAGGTTGATTTTAGGTTCTTACCATTTGGTGTGGGAAGGAGGAGTTGCCCTGGGATCATACTTGCATTACCAATATTGGGATTGGTGATTGCAAAGTTGGTGACAAATTTTGAGCTTAGTGCTCCAAATGAGACAAAGATAGATGTGAGTGAAAAAGGAGGACAATTTAGCTTGCACATTGCCAACCATTCCACTGTGTTGTTCCATCCAATTAGGACATGA 1599 0.4134 MSLLQVKPIFFTLITLALISITKLLCSHFSIPFPQSYLSIAGATLILYLFSSNTKHSTNLPPGPLSFPIFGNWLQVGNDLNHRLLASLSQTYGPVFLLKLGSKNLVVVSDPELSTQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSPMWEEEMDLVVHDVKINERVRSEGIVIRKRLQLMLYNIMYRMMFDTKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYYIEKRRKIMAANGDKHKITCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPTVQSKIRDEISKVLKGEQVTESNLHELPYLQATVKETSRLHAPIPLLVPHMNLEEAKLGGFTIPRESKVVVNAWWLANNPSWWKNPEEFRPERFLEEEHGTDAVAGGKVDFRFLPFGVGRRSCPGIILALPILGLVIAKLVTNFELSAPNETKIDVSEKGGQFSLHIANHSTVLFHPIRT* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03323 532 Gene3D Cytochrome P450 51 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 SUPERFAMILY Cytochrome P450 61 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 FunFam Trans-cinnamate 4-monooxygenase 50 524 - -
Rops6g03323 532 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Rops6g03323 532 Pfam Cytochrome P450 61 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops6g03323 532 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 38 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03323 Rops-Chr6 57714887 57716727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03323 70 529 Monolignol Biosynthesis Gene Families AT2G30490 65.443 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03323 K00487 - gmx:100812188 942.954