Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03285 ATGGCGGCACCATTCTCAAACCTCATTGCTTCTATCATGGTTTTCCATTTTCTTCTCATGGTTCATGGTTCAGTGAACCCAGATTTTGAAGCTCTTGTGGCATTCAAAACCGCTTCAGACACATCAAAAAAGCTCACAACTTGGAATACTAGCACCGACCCATGCACGTGGGGTGGTGTTTCTTGCATCAAAAACCGAGTTTCGCGACTCGTTCTGGAAAATCTCGACCTCCAAGGTTCCATTGAGCCCTTAACTCCGCTGACTCAGCTCAGAGTTTTGAGTCTCAAGGGTAACCGTTTTTCCGGTCACATTCCGAGTCTCTCCAACTTTACTGCTTTGAAGCTTCTGTTCTTGTCTCACAACAATTTTTCCGGCGAGTTCCCGTCGACGGTGACGCCGCTTTTCCGCTTGTACCGTCTCGATCTGTCACACAACAACTTCTCCGGCGAGATTCCGGCGACGGTCAACCGTTTGACCCACCTTCTCACTCTCCGTCTTGATGAGAATCGGTTCTCCGGTCACATTCCCGACGTGAACCTTCCCAACCTACAAGACTTCAACGTCTCCGGGAACCAACTCACCGGCGAGATACCGAAGTCGTTGTCGGGTTTCTCCGAATCCTCATTCGGGCAAAACCCGTTTCTCTGTGGAGCCCCGGTTGAGAAGAAATGTGGGGCTGAACCGACCAAACCCGGATCCGAAGGTGCCATTGCTTCACCATTGGCGCCACGTGGCAGCATCCCAACAACTGTGTCATCTTCACCTAGTACAATGCCAAGAACAACGAGTAGTACTAGTAGTAACCATCAACATGGAGGTTCGAAAATAAGCCCAGTGGCTCTGATAGCCATTATAGTGGGTGATGTTTTGGTACTTGGAGTAGTGTGTGTGCTTCTCTATTGCTACTTTTGGAGAAACTACACTTCTAAGTTGAAGGAAGGAAAAGGGTGCAAGCTTTTCGAGAGTGAAAAGATTGTTTATTCGTCGAGTCCGTACCCTGTTCAAGGAGGGTTTGAGAGGGGTAGAATGGTGTTCTTTGAAGGGGAGAAAAGGTTTGAACTTGAGGACTTGCTTAGAGCCTCAGCTGAAATGCTTGGAAAAGGTGGTTTTGGAACTGCTTACAAAGCGGTTCTTGATGATGGGAATGTTGTTGCTGTGAAGAGGCTCAAGGATGCGCAGATTGCAGGGAAGAGGGAGTTTGAGCAGCACATGGAAGTATTGGGAAGGTTAAGGCATCCCAACATTGTTAGTTTGAGGGCTTACTATTTTGCTCGAGAAGAGAAGCTTCTGGTCTATGATTACATGCCCAATGCCAGTTTGTTCTGGCTCCTTCATGGGAACCGAGGACCCGGACGAACCCCACTGGACTGGACCACGAGGCTTAAGATAGCAGCAGGAACAGCACGAGGCGTGGCTTTTATTCACAGCTCGTGCAAGTCCCTTAGGCTCACCCACGGTAACATCAAATCCACCAACATCCTCCTTGACAAGCAGGGAAATGCACGCGTGTCAGATTTTGGGCTGTCCATATTCGCTGGGCCGGGCCCAGCTAGTGGGAGATCCAACGGCTACCGTGCTCCGGAGGCATCGGACGGTCGAAAACAGTCACAGAAGTCTGACGTGTACTCTTTTGGGGTTCTGCTGTTGGAGCTGCTAACGGGGAAGTGTCCCTCCTTGGTGGACAGTGGTGGGCCAGGGAGTGCCTGTGGTGGGGTCATGGACCTGCCAAGGTGGGTCCAGTCAGTGGTGAGAGAGGAGTGGACGGCTGAGGTTTTTGATTTGGAGCTGATGAGGTACAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATAGCTATGTCTTGTACTGCGGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTCAAGATGATTGAGGAGTTGCGTGGGGTCGAGGTGTCACCCTCTCATGACACGTTGGACTCGGTGTCTGATTCACCTTCCTTGTCTGAAGATGCGTGTGGAACTAGTCAGTGA 2004 0.5075 MAAPFSNLIASIMVFHFLLMVHGSVNPDFEALVAFKTASDTSKKLTTWNTSTDPCTWGGVSCIKNRVSRLVLENLDLQGSIEPLTPLTQLRVLSLKGNRFSGHIPSLSNFTALKLLFLSHNNFSGEFPSTVTPLFRLYRLDLSHNNFSGEIPATVNRLTHLLTLRLDENRFSGHIPDVNLPNLQDFNVSGNQLTGEIPKSLSGFSESSFGQNPFLCGAPVEKKCGAEPTKPGSEGAIASPLAPRGSIPTTVSSSPSTMPRTTSSTSSNHQHGGSKISPVALIAIIVGDVLVLGVVCVLLYCYFWRNYTSKLKEGKGCKLFESEKIVYSSSPYPVQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEVLGRLRHPNIVSLRAYYFAREEKLLVYDYMPNASLFWLLHGNRGPGRTPLDWTTRLKIAAGTARGVAFIHSSCKSLRLTHGNIKSTNILLDKQGNARVSDFGLSIFAGPGPASGRSNGYRAPEASDGRKQSQKSDVYSFGVLLLELLTGKCPSLVDSGGPGSACGGVMDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAAAPDQRPRMSHVVKMIEELRGVEVSPSHDTLDSVSDSPSLSEDACGTSQ* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03285 667 MobiDBLite consensus disorder prediction 642 667 - -
Rops6g03285 667 FunFam Leucine-rich repeat receptor-like protein kinase 25 177 - -
Rops6g03285 667 MobiDBLite consensus disorder prediction 517 537 - -
Rops6g03285 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 639 IPR046959 -
Rops6g03285 667 SUPERFAMILY L domain-like 45 219 - -
Rops6g03285 667 SUPERFAMILY Protein kinase-like (PK-like) 363 634 IPR011009 -
Rops6g03285 667 Pfam Protein kinase domain 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03285 667 ProSitePatterns Protein kinases ATP-binding region signature. 365 397 IPR017441 GO:0005524
Rops6g03285 667 MobiDBLite consensus disorder prediction 245 273 - -
Rops6g03285 667 Gene3D Ribonuclease Inhibitor 86 231 IPR032675 -
Rops6g03285 667 Gene3D Transferase(Phosphotransferase) domain 1 435 653 - -
Rops6g03285 667 FunFam pollen receptor-like kinase 1 333 434 - -
Rops6g03285 667 Gene3D Ribonuclease Inhibitor 20 85 IPR032675 -
Rops6g03285 667 MobiDBLite consensus disorder prediction 226 273 - -
Rops6g03285 667 MobiDBLite consensus disorder prediction 646 667 - -
Rops6g03285 667 ProSiteProfiles Protein kinase domain profile. 359 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g03285 667 Gene3D Phosphorylase Kinase; domain 1 339 434 - -
Rops6g03285 667 CDD STKc_IRAK 365 637 - -
Rops6g03285 667 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Rops6g03285 667 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 435 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03285 Rops-Chr6 56933736 56936560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03285 28 667 Receptor kinase-like Gene Family AT1G68400 67.123 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops6g03285 Pkinase 7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03285 - - cam:105851082 1078.16